Difference between revisions of "3.6.3.8-RXN"

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(Created page with "Category:reaction == Reaction RXN-17877 == * direction: ** left-to-right * common-name: ** methionine aminopeptidase * ec-number: ** [http://enzyme.expasy.org/EC/3.4.11.18...")
(Created page with "Category:reaction == Reaction 3.4.23.1-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/3.4.23.1 ec-3.4.23.1] == Reaction formula == * 1 [...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-17877 ==
+
== Reaction 3.4.23.1-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** methionine aminopeptidase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.4.11.18 ec-3.4.11.18]
+
** [http://enzyme.expasy.org/EC/3.4.23.1 ec-3.4.23.1]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[L-methionyl-L-threonyl-Protein]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[MET]][c] '''+''' 1 [[Protein-N-terminal-L-threonine]][c]
+
* 1 [[General-Protein-Substrates]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Peptides-holder]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ02903]]
+
* Gene: [[SJ04995]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ16573]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ16932]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ18138]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ16939]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ01604]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7800]], Ac/N-end rule pathway:
 
−
** '''6''' reactions found over '''21''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q7M319 Q7M319]
 +
** [http://www.uniprot.org/uniprot/P04073 P04073]
 +
** [http://www.uniprot.org/uniprot/P13636 P13636]
 +
** [http://www.uniprot.org/uniprot/Q7LZP4 Q7LZP4]
 +
** [http://www.uniprot.org/uniprot/Q7LZF2 Q7LZF2]
 +
** [http://www.uniprot.org/uniprot/Q28158 Q28158]
 +
** [http://www.uniprot.org/uniprot/Q28157 Q28157]
 +
** [http://www.uniprot.org/uniprot/P00792 P00792]
 +
** [http://www.uniprot.org/uniprot/Q9PRG9 Q9PRG9]
 +
** [http://www.uniprot.org/uniprot/P00790 P00790]
 +
** [http://www.uniprot.org/uniprot/P03954 P03954]
 +
** [http://www.uniprot.org/uniprot/P11489 P11489]
 +
** [http://www.uniprot.org/uniprot/P00791 P00791]
 +
** [http://www.uniprot.org/uniprot/P27678 P27678]
 +
** [http://www.uniprot.org/uniprot/P27677 P27677]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=methionine aminopeptidase}}
+
{{#set: ec-number=ec-3.4.23.1}}
−
{{#set: ec-number=ec-3.4.11.18}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb gene associated=6}}
+
{{#set: nb pathway associated=0}}
−
{{#set: nb pathway associated=1}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction tool=pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}

Revision as of 19:04, 14 January 2021

Reaction 3.4.23.1-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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