Difference between revisions of "3.6.4.5-RXN"

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(Created page with "Category:reaction == Reaction CREATINASE-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/3.5.3.3 ec-3.5.3.3] == Reaction formula == * 1 [...")
(Created page with "Category:reaction == Reaction LUMAZINESYN-RXN == * direction: ** left-to-right * common-name: ** 6,7-dimethyl-8-ribityllumazine synthase * ec-number: ** [http://enzyme.exp...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction CREATINASE-RXN ==
+
== Reaction LUMAZINESYN-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** 6,7-dimethyl-8-ribityllumazine synthase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.5.3.3 ec-3.5.3.3]
+
** [http://enzyme.expasy.org/EC/2.5.1.78 ec-2.5.1.78]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CREATINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[SARCOSINE]][c] '''+''' 1 [[UREA]][c]
+
* 1 [[AMINO-RIBOSYLAMINO-1H-3H-PYR-DIONE]][c] '''+''' 1 [[DIHYDROXY-BUTANONE-P]][c] '''=>''' 1 [[DIMETHYL-D-RIBITYL-LUMAZINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c] '''+''' 2 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ16861]]
+
* Gene: [[SJ04442]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[CRNFORCAT-PWY]], creatinine degradation I:
+
* [[PWY-6167]], flavin biosynthesis II (archaea):
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
** '''5''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-6168]], flavin biosynthesis III (fungi):
 +
** '''7''' reactions found over '''9''' reactions in the full pathway
 +
* [[RIBOSYN2-PWY]], flavin biosynthesis I (bacteria and plants):
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R04457 R04457]
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22457 22457]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26152 26152]
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01566 R01566]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P38487 P38487]
 
−
** [http://www.uniprot.org/uniprot/P19213 P19213]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: ec-number=ec-3.5.3.3}}
+
{{#set: common-name=6,7-dimethyl-8-ribityllumazine synthase}}
 +
{{#set: ec-number=ec-2.5.1.78}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=3}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 19:07, 14 January 2021

Reaction LUMAZINESYN-RXN

  • direction:
    • left-to-right
  • common-name:
    • 6,7-dimethyl-8-ribityllumazine synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6167, flavin biosynthesis II (archaea):
    • 5 reactions found over 10 reactions in the full pathway
  • PWY-6168, flavin biosynthesis III (fungi):
    • 7 reactions found over 9 reactions in the full pathway
  • RIBOSYN2-PWY, flavin biosynthesis I (bacteria and plants):
    • 8 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





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