Difference between revisions of "3.6.4.6-RXN"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY66-394 PWY66-394] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-40674 tax...")
(Created page with "Category:reaction == Reaction METHYLENETHFDEHYDROG-NADP-RXN == * direction: ** reversible * common-name: ** methylenetetrahydrofolate dehydrogenase (nadp+) ** methylenetet...")
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY66-394 PWY66-394] ==
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== Reaction METHYLENETHFDEHYDROG-NADP-RXN ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-40674 tax-40674]
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** reversible
 
* common-name:
 
* common-name:
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** aspirin triggered resolvin e biosynthesis
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** methylenetetrahydrofolate dehydrogenase (nadp+)
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== Reaction(s) found ==
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** methylenetetrahydrofolate dehydrogenase
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* [[RXN-16139]]
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* ec-number:
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== Reaction(s) not found ==
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** [http://enzyme.expasy.org/EC/1.5.1.5 ec-1.5.1.5]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-20582 RXN-20582]
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== Reaction formula ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN66-494 RXN66-494]
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* 1 [[METHYLENE-THF-GLU-N]][c] '''+''' 1 [[NADP]][c] '''<=>''' 1 [[5-10-METHENYL-THF-GLU-N]][c] '''+''' 1 [[NADPH]][c]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN66-495 RXN66-495]
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== Gene(s) associated with this reaction  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN66-496 RXN66-496]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN66-547 RXN66-547]
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* Gene: [[SJ12991]]
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{{#set: taxonomic-range=tax-40674}}
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** Category: [[annotation]]
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{{#set: common-name=aspirin triggered resolvin e biosynthesis}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: nb reaction found=1}}
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* Gene: [[SJ02922]]
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{{#set: completion rate=0.17}}
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** Category: [[annotation]]
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{{#set: nb total reaction=6}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ10799]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ17385]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ11954]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ02262]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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</div>
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== Pathway(s) ==
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* [[1CMET2-PWY]], folate transformations III (E. coli):
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** '''8''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-5497]], purine nucleobases degradation II (anaerobic):
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** '''10''' reactions found over '''24''' reactions in the full pathway
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* [[CODH-PWY]], reductive acetyl coenzyme A pathway I (homoacetogenic bacteria):
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** '''4''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7909]], formaldehyde oxidation VII (THF pathway):
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-3841]], folate transformations II (plants):
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** '''9''' reactions found over '''11''' reactions in the full pathway
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* [[PWY-2201]], folate transformations I:
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** '''9''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-1722]], formate assimilation into 5,10-methylenetetrahydrofolate:
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** '''3''' reactions found over '''3''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
== External links  ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22815 22815]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R01220 R01220]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P09440 P09440]
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** [http://www.uniprot.org/uniprot/P07245 P07245]
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** [http://www.uniprot.org/uniprot/P11586 P11586]
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** [http://www.uniprot.org/uniprot/P44313 P44313]
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** [http://www.uniprot.org/uniprot/P47259 P47259]
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** [http://www.uniprot.org/uniprot/P54382 P54382]
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** [http://www.uniprot.org/uniprot/O67736 O67736]
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** [http://www.uniprot.org/uniprot/Q9JWI9 Q9JWI9]
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** [http://www.uniprot.org/uniprot/Q9PP68 Q9PP68]
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** [http://www.uniprot.org/uniprot/P24186 P24186]
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** [http://www.uniprot.org/uniprot/Q60006 Q60006]
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** [http://www.uniprot.org/uniprot/Q27772 Q27772]
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** [http://www.uniprot.org/uniprot/P51696 P51696]
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** [http://www.uniprot.org/uniprot/O65269 O65269]
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** [http://www.uniprot.org/uniprot/O65271 O65271]
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** [http://www.uniprot.org/uniprot/O68031 O68031]
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** [http://www.uniprot.org/uniprot/Q9ZTV0 Q9ZTV0]
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** [http://www.uniprot.org/uniprot/Q9X7F6 Q9X7F6]
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</div>
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{{#set: direction=reversible}}
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{{#set: common-name=methylenetetrahydrofolate dehydrogenase (nadp+)|methylenetetrahydrofolate dehydrogenase}}
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{{#set: ec-number=ec-1.5.1.5}}
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{{#set: nb gene associated=6}}
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{{#set: nb pathway associated=7}}
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{{#set: reconstruction category=annotation|orthology}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 20:45, 18 December 2020

Reaction METHYLENETHFDEHYDROG-NADP-RXN

  • direction:
    • reversible
  • common-name:
    • methylenetetrahydrofolate dehydrogenase (nadp+)
    • methylenetetrahydrofolate dehydrogenase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • 1CMET2-PWY, folate transformations III (E. coli):
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-5497, purine nucleobases degradation II (anaerobic):
    • 10 reactions found over 24 reactions in the full pathway
  • CODH-PWY, reductive acetyl coenzyme A pathway I (homoacetogenic bacteria):
    • 4 reactions found over 9 reactions in the full pathway
  • PWY-7909, formaldehyde oxidation VII (THF pathway):
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-3841, folate transformations II (plants):
    • 9 reactions found over 11 reactions in the full pathway
  • PWY-2201, folate transformations I:
    • 9 reactions found over 10 reactions in the full pathway
  • PWY-1722, formate assimilation into 5,10-methylenetetrahydrofolate:
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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