Difference between revisions of "3R-11Z-3-hydroxy-icos-11-enoyl-ACPs"

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(Created page with "Category:gene == Gene SJ15145 == * transcription-direction: ** negative * right-end-position: ** 54558 * left-end-position: ** 45549 * centisome-position: ** 15.132507...")
(Created page with "Category:metabolite == Metabolite CPD-12365 == * common-name: ** 8-oxo-dgmp * smiles: ** c(op(=o)([o-])[o-])c1(oc(cc(o)1)n3(c(=o)nc2(c(=o)nc(n)=nc=23))) * inchi-key: ** aq...")
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[[Category:gene]]
+
[[Category:metabolite]]
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== Gene SJ15145 ==
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== Metabolite CPD-12365 ==
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* transcription-direction:
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* common-name:
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** negative
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** 8-oxo-dgmp
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* right-end-position:
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* smiles:
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** 54558
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** c(op(=o)([o-])[o-])c1(oc(cc(o)1)n3(c(=o)nc2(c(=o)nc(n)=nc=23)))
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* left-end-position:
+
* inchi-key:
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** 45549
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** aqivlflyhyfrku-vpeninkcsa-l
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* centisome-position:
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* molecular-weight:
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** 15.132507   
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** 361.207
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to consume the compound ==
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* [[S.japonica_carotenoid_curated]]
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* [[RXN-14205]]
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== Reaction(s) associated ==
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== Reaction(s) known to produce the compound ==
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* [[ATPASE-RXN]]
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* [[RXN-11396]]
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** Category: [[annotation]]
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* [[RXN-12816]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-14205]]
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
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{{#set: common-name=8-oxo-dgmp}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: inchi-key=inchikey=aqivlflyhyfrku-vpeninkcsa-l}}
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* [[RXN-12195]]
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{{#set: molecular-weight=361.207}}
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN-12196]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* [[RXN0-5462]]
 
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** Category: [[annotation]]
 
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
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== Pathway(s) associated ==
 
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* [[PWY-7210]]
 
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** '''8''' reactions found over '''8''' reactions in the full pathway
 
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* [[PWY-7198]]
 
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** '''6''' reactions found over '''7''' reactions in the full pathway
 
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* [[PWY-7184]]
 
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** '''9''' reactions found over '''9''' reactions in the full pathway
 
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* [[PWY-6545]]
 
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** '''8''' reactions found over '''9''' reactions in the full pathway
 
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{{#set: transcription-direction=negative}}
 
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{{#set: right-end-position=54558}}
 
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{{#set: left-end-position=45549}}
 
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{{#set: centisome-position=15.132507    }}
 
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 
−
{{#set: nb reaction associated=5}}
 
−
{{#set: nb pathway associated=4}}
 

Revision as of 20:30, 18 December 2020

Metabolite CPD-12365

  • common-name:
    • 8-oxo-dgmp
  • smiles:
    • c(op(=o)([o-])[o-])c1(oc(cc(o)1)n3(c(=o)nc2(c(=o)nc(n)=nc=23)))
  • inchi-key:
    • aqivlflyhyfrku-vpeninkcsa-l
  • molecular-weight:
    • 361.207

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

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