Difference between revisions of "4-COUMARATE--COA-LIGASE-RXN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8773 RXN-8773] == * direction: ** reversible * common-name: ** d-xylose reductase * ec-number:...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11354 RXN-11354] == * direction: ** reversible * common-name: ** 15-cis-ζ-carotene isomera...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8773 RXN-8773] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11354 RXN-11354] ==
 
* direction:
 
* direction:
 
** reversible
 
** reversible
 
* common-name:
 
* common-name:
−
** d-xylose reductase
+
** 15-cis-ζ-carotene isomerase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.1.1.21 ec-1.1.1.21]
+
** [http://enzyme.expasy.org/EC/5.2.1.12 ec-5.2.1.12]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[NADP]][c] '''+''' 1 [[XYLITOL]][c] '''<=>''' 1 [[D-Xylopyranose]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[CPD-7535]][c] '''<=>''' 1 [[CPD-7526]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ05644]]
+
* Gene: [[SJ04715]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5516]], D-xylose degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5516 PWY-5516]
+
* [[PWY-6475]], trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6475 PWY-6475]
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''8''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R09655 R09655]
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27448 27448]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30970 30970]
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01431 R01431]
 
 
{{#set: direction=reversible}}
 
{{#set: direction=reversible}}
−
{{#set: common-name=d-xylose reductase}}
+
{{#set: common-name=15-cis-&zeta;-carotene isomerase}}
−
{{#set: ec-number=ec-1.1.1.21}}
+
{{#set: ec-number=ec-5.2.1.12}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 09:30, 27 August 2019

Reaction RXN-11354

  • direction:
    • reversible
  • common-name:
    • 15-cis-ζ-carotene isomerase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6475, trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria): PWY-6475
    • 8 reactions found over 8 reactions in the full pathway

Reconstruction information

External links





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=4-COUMARATE--COA-LIGASE-RXN&oldid=36182"