Difference between revisions of "4-HYDROXY-L-PROLINE"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRYPTOPHAN-AMINOTRANSFERASE-RXN TRYPTOPHAN-AMINOTRANSFERASE-RXN] == * direction: ** reversible * co...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADENYLOSUCCINATE-SYNTHASE-RXN ADENYLOSUCCINATE-SYNTHASE-RXN] == * direction: ** left-to-right * com...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRYPTOPHAN-AMINOTRANSFERASE-RXN TRYPTOPHAN-AMINOTRANSFERASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADENYLOSUCCINATE-SYNTHASE-RXN ADENYLOSUCCINATE-SYNTHASE-RXN] ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** l-tryptophan:2-oxoglutarate aminotransferase
+
** adenylosuccinate synthetase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.6.1.27 ec-2.6.1.27]
+
** [http://enzyme.expasy.org/EC/6.3.4.4 ec-6.3.4.4]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[TRP]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[INDOLE_PYRUVATE]][c]
+
* 1 [[GTP]][c] '''+''' 1 [[IMP]][c] '''+''' 1 [[L-ASPARTATE]][c] '''=>''' 1 [[ADENYLOSUCC]][c] '''+''' 1 [[GDP]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ04188]]
+
* Gene: [[SJ04091]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5081]], L-tryptophan degradation VIII (to tryptophol): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5081 PWY-5081]
+
* [[PWY-7219]], adenosine ribonucleotides de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7219 PWY-7219]
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
** '''4''' reactions found over '''3''' reactions in the full pathway
−
* [[TRPKYNCAT-PWY]], L-tryptophan degradation IV (via indole-3-lactate): [http://metacyc.org/META/NEW-IMAGE?object=TRPKYNCAT-PWY TRPKYNCAT-PWY]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[TRPIAACAT-PWY]], indole-3-acetate biosynthesis VI (bacteria): [http://metacyc.org/META/NEW-IMAGE?object=TRPIAACAT-PWY TRPIAACAT-PWY]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-581]], indole-3-acetate biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-581 PWY-581]
 
−
** '''5''' reactions found over '''12''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14096 14096]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15753 15753]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00684 R00684]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01135 R01135]
−
{{#set: direction=reversible}}
+
* UNIPROT:
−
{{#set: common-name=l-tryptophan:2-oxoglutarate aminotransferase}}
+
** [http://www.uniprot.org/uniprot/P29726 P29726]
−
{{#set: ec-number=ec-2.6.1.27}}
+
** [http://www.uniprot.org/uniprot/P46664 P46664]
 +
** [http://www.uniprot.org/uniprot/Q57981 Q57981]
 +
** [http://www.uniprot.org/uniprot/P21900 P21900]
 +
** [http://www.uniprot.org/uniprot/P0A7D4 P0A7D4]
 +
** [http://www.uniprot.org/uniprot/P28650 P28650]
 +
** [http://www.uniprot.org/uniprot/Q9JV25 Q9JV25]
 +
** [http://www.uniprot.org/uniprot/P45283 P45283]
 +
** [http://www.uniprot.org/uniprot/Q9PMG4 Q9PMG4]
 +
** [http://www.uniprot.org/uniprot/Q9CE93 Q9CE93]
 +
** [http://www.uniprot.org/uniprot/P52151 P52151]
 +
** [http://www.uniprot.org/uniprot/P80210 P80210]
 +
** [http://www.uniprot.org/uniprot/Q49087 Q49087]
 +
** [http://www.uniprot.org/uniprot/O24578 O24578]
 +
** [http://www.uniprot.org/uniprot/Q96529 Q96529]
 +
** [http://www.uniprot.org/uniprot/O24396 O24396]
 +
** [http://www.uniprot.org/uniprot/Q02787 Q02787]
 +
</div>
 +
{{#set: direction=left-to-right}}
 +
{{#set: common-name=adenylosuccinate synthetase}}
 +
{{#set: ec-number=ec-6.3.4.4}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome|output_pantograph_nannochloropsis_salina}}

Revision as of 09:29, 27 August 2019

Reaction ADENYLOSUCCINATE-SYNTHASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • adenylosuccinate synthetase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7219, adenosine ribonucleotides de novo biosynthesis: PWY-7219
    • 4 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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