Difference between revisions of "4-PHOSPHONOOXY-THREONINE"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.7.60-RXN 2.7.7.60-RXN] == * direction: ** left-to-right * common-name: ** 4-diphosphocytidyl-2c...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12567 RXN-12567] == * direction: ** left-to-right * common-name: ** enoyl-coa hydratase ** 3-hy...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.7.60-RXN 2.7.7.60-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12567 RXN-12567] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** 4-diphosphocytidyl-2c-methyl-d-erythritol synthase
+
** enoyl-coa hydratase
 +
** 3-hydroxyhexanoyl-coa dehydratase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.7.60 ec-2.7.7.60]
+
** [http://enzyme.expasy.org/EC/4.2.1.17 ec-4.2.1.17]
−
* synonymous:
 
−
** 4-diphosphocytidyl-2-methylerithritol synthase (sugar nucleotide phosphorylase family)
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-C-METHYL-D-ERYTHRITOL-4-PHOSPHATE]][c] '''+''' 1 [[CTP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[4-CYTIDINE-5-DIPHOSPHO-2-C]][c] '''+''' 1 [[PPI]][c]
+
* 1 [[OH-HEXANOYL-COA]][c] '''=>''' 1 [[CPD0-2121]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ10622]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ00040]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ03913]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ03584]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ10275]]
 +
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ21390]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ07211]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ14591]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7560]], methylerythritol phosphate pathway II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7560 PWY-7560]
+
* [[PWY-6863]], pyruvate fermentation to hexanol (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6863 PWY-6863]
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
** '''9''' reactions found over '''11''' reactions in the full pathway
−
* [[NONMEVIPP-PWY]], methylerythritol phosphate pathway I: [http://metacyc.org/META/NEW-IMAGE?object=NONMEVIPP-PWY NONMEVIPP-PWY]
 
−
** '''9''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13429 13429]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30549 30549]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R05633 R05633]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04749 R04749]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=4-diphosphocytidyl-2c-methyl-d-erythritol synthase}}
+
{{#set: common-name=3-hydroxyhexanoyl-coa dehydratase|enoyl-coa hydratase}}
−
{{#set: ec-number=ec-2.7.7.60}}
+
{{#set: ec-number=ec-4.2.1.17}}
−
{{#set: synonymous=4-diphosphocytidyl-2-methylerithritol synthase (sugar nucleotide phosphorylase family)}}
+
{{#set: nb gene associated=7}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb pathway associated=1}}
−
{{#set: nb pathway associated=2}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction category=orthology|annotation}}
 
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}

Revision as of 09:29, 27 August 2019

Reaction RXN-12567

  • direction:
    • left-to-right
  • common-name:
    • enoyl-coa hydratase
    • 3-hydroxyhexanoyl-coa dehydratase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6863, pyruvate fermentation to hexanol (engineered): PWY-6863
    • 9 reactions found over 11 reactions in the full pathway

Reconstruction information

External links





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=4-PHOSPHONOOXY-THREONINE&oldid=34681"