Difference between revisions of "4.1.99.4-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-328 RXN3O-328] == * direction: ** left-to-right * common-name: ** 4-hydroxysphinganine n-acyl...")
(Created page with "Category:reaction == Reaction 4.1.99.4-RXN == * direction: ** left-to-right * common-name: ** 1-aminocyclopropane-1-carboxylate deaminase * ec-number: ** [http://enzyme.ex...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-328 RXN3O-328] ==
+
== Reaction 4.1.99.4-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** 4-hydroxysphinganine n-acyltransferase
+
** 1-aminocyclopropane-1-carboxylate deaminase
−
** ceramide synthase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.3.1.24 ec-2.3.1.24]
+
** [http://enzyme.expasy.org/EC/3.5.99.7 ec-3.5.99.7]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[PHYTOSPINGOSINE]][c] '''+''' 1 [[VERY-LONG-CHAIN-FATTY-ACYL-COA]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Phytoceramides]][c]
+
* 1 [[CPD-68]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[2-OXOBUTANOATE]][c] '''+''' 1 [[AMMONIUM]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ06297]]
+
* Gene: [[SJ20325]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[SPHINGOLIPID-SYN-PWY]], sphingolipid biosynthesis (yeast): [http://metacyc.org/META/NEW-IMAGE?object=SPHINGOLIPID-SYN-PWY SPHINGOLIPID-SYN-PWY]
 
−
** '''4''' reactions found over '''11''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR95217
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16934 16934]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00997 R00997]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q9V2L2 Q9V2L2]
 +
** [http://www.uniprot.org/uniprot/Q9WY68 Q9WY68]
 +
** [http://www.uniprot.org/uniprot/P30297 P30297]
 +
** [http://www.uniprot.org/uniprot/Q7M523 Q7M523]
 +
** [http://www.uniprot.org/uniprot/Q9URX3 Q9URX3]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=ceramide synthase|4-hydroxysphinganine n-acyltransferase}}
+
{{#set: common-name=1-aminocyclopropane-1-carboxylate deaminase}}
−
{{#set: ec-number=ec-2.3.1.24}}
+
{{#set: ec-number=ec-3.5.99.7}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:21, 18 March 2021

Reaction 4.1.99.4-RXN

  • direction:
    • left-to-right
  • common-name:
    • 1-aminocyclopropane-1-carboxylate deaminase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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