Difference between revisions of "4.1.99.4-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-328 RXN3O-328] == * direction: ** left-to-right * common-name: ** 4-hydroxysphinganine n-acyl...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIAMINOPIMELATE-DEHYDROGENASE-RXN DIAMINOPIMELATE-DEHYDROGENASE-RXN] == * direction: ** reversible...")
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-328 RXN3O-328] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIAMINOPIMELATE-DEHYDROGENASE-RXN DIAMINOPIMELATE-DEHYDROGENASE-RXN] ==
 
* direction:
 
* direction:
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** left-to-right
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** reversible
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* common-name:
 
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** 4-hydroxysphinganine n-acyltransferase
 
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** ceramide synthase
 
 
* ec-number:
 
* ec-number:
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** [http://enzyme.expasy.org/EC/2.3.1.24 ec-2.3.1.24]
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** [http://enzyme.expasy.org/EC/1.4.1.16 ec-1.4.1.16]
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[PHYTOSPINGOSINE]][c] '''+''' 1 [[VERY-LONG-CHAIN-FATTY-ACYL-COA]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Phytoceramides]][c]
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* 1 [[MESO-DIAMINOPIMELATE]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[L-ALPHA-AMINO-EPSILON-KETO-PIMELATE]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[SJ06297]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[SPHINGOLIPID-SYN-PWY]], sphingolipid biosynthesis (yeast): [http://metacyc.org/META/NEW-IMAGE?object=SPHINGOLIPID-SYN-PWY SPHINGOLIPID-SYN-PWY]
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* [[PWY-2942]], L-lysine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2942 PWY-2942]
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** '''4''' reactions found over '''11''' reactions in the full pathway
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** '''6''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[manual]]; source: [[previous_meneco]]; tool: [[curation]]; comment: reaction added with meneco (previous version)
 
== External links  ==
 
== External links  ==
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{{#set: direction=left-to-right}}
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* RHEA:
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{{#set: common-name=ceramide synthase|4-hydroxysphinganine n-acyltransferase}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13564 13564]
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{{#set: ec-number=ec-2.3.1.24}}
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* LIGAND-RXN:
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{{#set: nb gene associated=1}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02755 R02755]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P04964 P04964]
 +
{{#set: direction=reversible}}
 +
{{#set: ec-number=ec-1.4.1.16}}
 +
{{#set: nb gene associated=0}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction tool=curation}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction comment=reaction added with meneco (previous version)}}
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{{#set: reconstruction source=saccharina_japonica_genome}}
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{{#set: reconstruction source=previous_meneco}}

Revision as of 09:32, 27 August 2019

Reaction DIAMINOPIMELATE-DEHYDROGENASE-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-2942, L-lysine biosynthesis III: PWY-2942
    • 6 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





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