Difference between revisions of "4.2.1.93-RXN"

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(Created page with "Category:reaction == Reaction RXN-13729 == * direction: ** left-to-right * common-name: ** phytosphingosine 1-phosphate aldolase * ec-number: ** [http://enzyme.expasy.org/...")
(Created page with "Category:reaction == Reaction 4.2.1.93-RXN == * direction: ** left-to-right * common-name: ** atp-dependent nadh-hydrate dehydratase * ec-number: ** [http://enzyme.expasy....")
 
(One intermediate revision by the same user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-13729 ==
+
== Reaction 4.2.1.93-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** phytosphingosine 1-phosphate aldolase
+
** atp-dependent nadh-hydrate dehydratase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.1.2.27 ec-4.1.2.27]
+
** [http://enzyme.expasy.org/EC/4.2.1.93 ec-4.2.1.93]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[PHTYOSPHINGOSINE-1-P]][c] '''=>''' 1 [[CPD-14766]][c] '''+''' 1 [[PHOSPHORYL-ETHANOLAMINE]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[CPD-653]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ19063]]
+
* Gene: [[SJ04267]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7119]], ceramide and sphingolipid recycling and degradation (yeast):
+
* [[PWY-6938]], NADH repair (eukaryotes):
−
** '''4''' reactions found over '''16''' reactions in the full pathway
+
** '''2''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR106402
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19018 19018]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00129 R00129]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=phytosphingosine 1-phosphate aldolase}}
+
{{#set: common-name=atp-dependent nadh-hydrate dehydratase}}
−
{{#set: ec-number=ec-4.1.2.27}}
+
{{#set: ec-number=ec-4.2.1.93}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:20, 18 March 2021

Reaction 4.2.1.93-RXN

  • direction:
    • left-to-right
  • common-name:
    • atp-dependent nadh-hydrate dehydratase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6938, NADH repair (eukaryotes):
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR106402
  • RHEA:
  • LIGAND-RXN:





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