Difference between revisions of "4.2.2.10-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HEXOKINASE-RXN HEXOKINASE-RXN] == * direction: ** left-to-right * common-name: ** hexokinase * ec-n...")
(Created page with "Category:reaction == Reaction ALLANTOICASE-RXN == * direction: ** left-to-right * common-name: ** allantoicase * ec-number: ** [http://enzyme.expasy.org/EC/3.5.3.4 ec-3.5....")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HEXOKINASE-RXN HEXOKINASE-RXN] ==
+
== Reaction ALLANTOICASE-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** hexokinase
+
** allantoicase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.1.1 ec-2.7.1.1]
+
** [http://enzyme.expasy.org/EC/3.5.3.4 ec-3.5.3.4]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[D-Hexoses]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[D-HEXOSE-6-PHOSPHATE]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[ALLANTOATE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-1091]][c] '''+''' 1 [[UREA]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ04919]]
+
* Gene: [[SJ11493]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ19906]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ12224]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-5697]], allantoin degradation to ureidoglycolate I (urea producing):
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22740 22740]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11017 11017]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02848 R02848]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02422 R02422]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P17712 P17712]
+
** [http://www.uniprot.org/uniprot/P18407 P18407]
−
** [http://www.uniprot.org/uniprot/P19367 P19367]
+
** [http://www.uniprot.org/uniprot/P25335 P25335]
−
** [http://www.uniprot.org/uniprot/P05708 P05708]
+
** [http://www.uniprot.org/uniprot/Q09913 Q09913]
−
** [http://www.uniprot.org/uniprot/P35557 P35557]
 
−
** [http://www.uniprot.org/uniprot/P33284 P33284]
 
−
** [http://www.uniprot.org/uniprot/Q02155 Q02155]
 
−
** [http://www.uniprot.org/uniprot/P52789 P52789]
 
−
** [http://www.uniprot.org/uniprot/P04806 P04806]
 
−
** [http://www.uniprot.org/uniprot/P04807 P04807]
 
−
** [http://www.uniprot.org/uniprot/Q64596 Q64596]
 
−
** [http://www.uniprot.org/uniprot/P27926 P27926]
 
−
** [http://www.uniprot.org/uniprot/P27881 P27881]
 
−
** [http://www.uniprot.org/uniprot/P50521 P50521]
 
−
** [http://www.uniprot.org/uniprot/Q09756 Q09756]
 
−
** [http://www.uniprot.org/uniprot/Q42525 Q42525]
 
−
** [http://www.uniprot.org/uniprot/O64390 O64390]
 
−
** [http://www.uniprot.org/uniprot/P78848 P78848]
 
−
</div>
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=hexokinase}}
+
{{#set: common-name=allantoicase}}
−
{{#set: ec-number=ec-2.7.1.1}}
+
{{#set: ec-number=ec-3.5.3.4}}
−
{{#set: nb gene associated=3}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus|output_pantograph_nannochloropsis_salina}}

Revision as of 20:40, 18 December 2020

Reaction ALLANTOICASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • allantoicase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5697, allantoin degradation to ureidoglycolate I (urea producing):
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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