Difference between revisions of "4.99.1.3-RXN"

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(Created page with "Category:reaction == Reaction 1.18.1.2-RXN == * direction: ** reversible * common-name: ** ferredoxin nadp reductase * ec-number: ** [http://enzyme.expasy.org/EC/1.18.1.2...")
(Created page with "Category:reaction == Reaction 4.99.1.3-RXN == * direction: ** left-to-right * common-name: ** sirohydrochlorin cobaltochelatase * ec-number: ** [http://enzyme.expasy.org/E...")
 
(3 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 1.18.1.2-RXN ==
+
== Reaction 4.99.1.3-RXN ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** ferredoxin nadp reductase
+
** sirohydrochlorin cobaltochelatase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.18.1.2 ec-1.18.1.2]
+
** [http://enzyme.expasy.org/EC/4.99.1.3 ec-4.99.1.3]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[NADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 2 [[Reduced-ferredoxins]][e] '''<=>''' 1 [[NADPH]][c] '''+''' 2 [[Oxidized-ferredoxins]][e]
+
* 1 [[CO+2]][c] '''+''' 1 [[SIROHYDROCHLORIN]][c] '''=>''' 1 [[COBALT-SIROHYDROCHLORIN]][c] '''+''' 2 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ09107]]
+
* Gene: [[SJ19170]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ15967]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-101]], photosynthesis light reactions:
+
* [[PWY-7377]], cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion):
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
** '''4''' reactions found over '''15''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR109851
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15893 15893]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01195 R01195]
+
** [http://www.genome.jp/dbget-bin/www_bget?R05807 R05807]
−
{{#set: direction=reversible}}
+
{{#set: direction=left-to-right}}
−
{{#set: common-name=ferredoxin nadp reductase}}
+
{{#set: common-name=sirohydrochlorin cobaltochelatase}}
−
{{#set: ec-number=ec-1.18.1.2}}
+
{{#set: ec-number=ec-4.99.1.3}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:18, 18 March 2021

Reaction 4.99.1.3-RXN

  • direction:
    • left-to-right
  • common-name:
    • sirohydrochlorin cobaltochelatase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7377, cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion):
    • 4 reactions found over 15 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR109851
  • RHEA:
  • LIGAND-RXN:





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