Difference between revisions of "44-DIMETHYL-CHOLESTA-814-24-TRIENOL"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYOXI-RXN GLYOXI-RXN] == * direction: ** reversible * common-name: ** glyoxalase i ** lactoylgluta...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=5-NUCLEOTID-RXN 5-NUCLEOTID-RXN] == * direction: ** left-to-right * common-name: ** pyrimidine nucl...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYOXI-RXN GLYOXI-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=5-NUCLEOTID-RXN 5-NUCLEOTID-RXN] ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** glyoxalase i
+
** pyrimidine nucleotidase
−
** lactoylglutathione lyase
+
** 5'-nucleotidase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.4.1.5 ec-4.4.1.5]
+
** [http://enzyme.expasy.org/EC/3.1.3.5 ec-3.1.3.5]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[S-LACTOYL-GLUTATHIONE]][c] '''<=>''' 1 [[GLUTATHIONE]][c] '''+''' 1 [[METHYL-GLYOXAL]][c]
+
* 1 [[Ribonucleoside-Monophosphates]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[Ribonucleosides]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* Gene: [[SJ17178]]
+
* Gene: [[SJ15366]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ19492]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ20171]]
+
* Gene: [[SJ16098]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ11959]]
+
* Gene: [[SJ18895]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ02270]]
+
* Gene: [[SJ18402]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ13886]]
+
* Gene: [[SJ09030]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
</div>
 
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5386]], methylglyoxal degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5386 PWY-5386]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19072 19072]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12485 12485]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02530 R02530]
+
** [http://www.genome.jp/dbget-bin/www_bget?R07297 R07297]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q04760 Q04760]
+
** [http://www.uniprot.org/uniprot/P06196 P06196]
−
** [http://www.uniprot.org/uniprot/P0AC81 P0AC81]
+
** [http://www.uniprot.org/uniprot/P21588 P21588]
−
** [http://www.uniprot.org/uniprot/P0A0T3 P0A0T3]
+
** [http://www.uniprot.org/uniprot/O34313 O34313]
−
** [http://www.uniprot.org/uniprot/P0A0T2 P0A0T2]
+
** [http://www.uniprot.org/uniprot/Q9KM44 Q9KM44]
−
** [http://www.uniprot.org/uniprot/P44638 P44638]
+
** [http://www.uniprot.org/uniprot/O29385 O29385]
−
** [http://www.uniprot.org/uniprot/P0A1Q2 P0A1Q2]
+
** [http://www.uniprot.org/uniprot/P44569 P44569]
−
** [http://www.uniprot.org/uniprot/P46417 P46417]
+
** [http://www.uniprot.org/uniprot/O83142 O83142]
−
** [http://www.uniprot.org/uniprot/Q42891 Q42891]
+
** [http://www.uniprot.org/uniprot/P49902 P49902]
−
** [http://www.uniprot.org/uniprot/Q55595 Q55595]
+
** [http://www.uniprot.org/uniprot/P22848 P22848]
−
** [http://www.uniprot.org/uniprot/Q09751 Q09751]
+
** [http://www.uniprot.org/uniprot/Q05927 Q05927]
−
** [http://www.uniprot.org/uniprot/Q9XGF2 Q9XGF2]
+
** [http://www.uniprot.org/uniprot/P21589 P21589]
−
** [http://www.uniprot.org/uniprot/P16635 P16635]
+
** [http://www.uniprot.org/uniprot/P29240 P29240]
−
{{#set: direction=reversible}}
+
** [http://www.uniprot.org/uniprot/P07024 P07024]
−
{{#set: common-name=glyoxalase i|lactoylglutathione lyase}}
+
{{#set: direction=left-to-right}}
−
{{#set: ec-number=ec-4.4.1.5}}
+
{{#set: common-name=5'-nucleotidase|pyrimidine nucleotidase}}
−
{{#set: nb gene associated=6}}
+
{{#set: ec-number=ec-3.1.3.5}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb gene associated=5}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: nb pathway associated=0}}
 +
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Revision as of 09:29, 27 August 2019

Reaction 5-NUCLEOTID-RXN

  • direction:
    • left-to-right
  • common-name:
    • pyrimidine nucleotidase
    • 5'-nucleotidase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=44-DIMETHYL-CHOLESTA-814-24-TRIENOL&oldid=35386"