Difference between revisions of "5-NUCLEOTID-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13565 RXN-13565] == * direction: ** left-to-right * common-name: ** nitric-oxide synthase == Re...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1106 RXN-1106] == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1....")
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13565 RXN-13565] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1106 RXN-1106] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
+
* ec-number:
−
** nitric-oxide synthase
+
** [http://enzyme.expasy.org/EC/1.2.1.44 ec-1.2.1.44]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 2 [[CPD-13518]][c] '''+''' 1 [[NADPH]][c] '''+''' 2 [[OXYGEN-MOLECULE]][c] '''=>''' 2 [[L-CITRULLINE]][c] '''+''' 1 [[NADP]][c] '''+''' 2 [[NITRIC-OXIDE]][c] '''+''' 1 [[PROTON]][c] '''+''' 2 [[WATER]][c]
+
* 1 [[FERULOYL-COA]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[CONIFERYL-ALDEHYDE]][c] '''+''' 1 [[NADP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ17015]]
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* Gene: [[SJ06064]]
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** Category: [[annotation]]
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** Category: [[orthology]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ17014]]
+
* Gene: [[SJ12213]]
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** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ21972]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6845]], nitric oxide biosynthesis I (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6845 PWY-6845]
+
* [[PWY-361]], phenylpropanoid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-361 PWY-361]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''7''' reactions found over '''15''' reactions in the full pathway
 +
* [[PWY-6027]], capsiconiate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6027 PWY-6027]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24665 24665]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00111 R00111]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02193 R02193]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=nitric-oxide synthase}}
+
{{#set: ec-number=ec-1.2.1.44}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=3}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana}}

Revision as of 09:32, 27 August 2019

Reaction RXN-1106

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-361, phenylpropanoid biosynthesis: PWY-361
    • 7 reactions found over 15 reactions in the full pathway
  • PWY-6027, capsiconiate biosynthesis: PWY-6027
    • 1 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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