Difference between revisions of "5-OXOPROLINASE-ATP-HYDROLYSING-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.1.1.143-RXN 2.1.1.143-RXN] == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy...")
 
(Created page with "Category:reaction == Reaction 5-OXOPROLINASE-ATP-HYDROLYSING-RXN == * direction: ** left-to-right * common-name: ** 5-oxo-l-prolinase * ec-number: ** [http://enzyme.expasy...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.1.1.143-RXN 2.1.1.143-RXN] ==
+
== Reaction 5-OXOPROLINASE-ATP-HYDROLYSING-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** 5-oxo-l-prolinase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.1.1.143 ec-2.1.1.143]
+
** [http://enzyme.expasy.org/EC/3.5.2.9 ec-3.5.2.9]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-4101]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[CPD-4124]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[5-OXOPROLINE]][c] '''+''' 1 [[ATP]][c] '''+''' 2 [[WATER]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[SJ14596]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-2541]], phytosterol biosynthesis (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-2541 PWY-2541]
+
* [[PWY-4041]], γ-glutamyl cycle:
−
** '''11''' reactions found over '''35''' reactions in the full pathway
+
** '''5''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7942]], 5-oxo-L-proline metabolism:
 +
** '''1''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR138674
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21045 21045]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10349 10349]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R05776 R05776]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00251 R00251]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P97608 P97608]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: ec-number=ec-2.1.1.143}}
+
{{#set: common-name=5-oxo-l-prolinase}}
−
{{#set: nb gene associated=0}}
+
{{#set: ec-number=ec-3.5.2.9}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb gene associated=1}}
−
{{#set: reconstruction category=gap-filling}}
+
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction tool=meneco}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction comment=added for gapfilling}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
+
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}}

Latest revision as of 11:20, 18 March 2021

Reaction 5-OXOPROLINASE-ATP-HYDROLYSING-RXN

  • direction:
    • left-to-right
  • common-name:
    • 5-oxo-l-prolinase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-4041, γ-glutamyl cycle:
    • 5 reactions found over 4 reactions in the full pathway
  • PWY-7942, 5-oxo-L-proline metabolism:
    • 1 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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