Difference between revisions of "5-OXOPROLINE"
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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9527 RXN-9527] == * direction: ** left-to-right * common-name: ** 3-oxo-decanoyl-[acyl-carrier...") |
(Created page with "Category:gene == Gene SJ07135 == * transcription-direction: ** negative * right-end-position: ** 60314 * left-end-position: ** 13329 * centisome-position: ** 18.867844...") |
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Line 1: | Line 1: | ||
− | [[Category: | + | [[Category:gene]] |
− | == | + | == Gene SJ07135 == |
− | * direction: | + | * transcription-direction: |
− | ** | + | ** negative |
− | * | + | * right-end-position: |
− | ** | + | ** 60314 |
− | ** | + | * left-end-position: |
− | * | + | ** 13329 |
− | ** | + | * centisome-position: |
− | + | ** 18.867844 | |
− | == | + | == Organism(s) associated with this gene == |
− | * | + | * [[S.japonica_carotenoid_curated]] |
− | == | + | == Reaction(s) associated == |
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
− | * | + | * [[ATPASE-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
− | *** | + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
+ | * [[DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN]] | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
− | *** | + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
− | * | + | * [[H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN]] |
− | *** | + | ** Category: [[orthology]] |
− | * | + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
+ | * [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
− | *** | + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
− | * | + | * [[RXN-11135]] |
− | ** | + | ** Category: [[annotation]] |
− | *** | + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
− | * | + | * [[RXN-12195]] |
− | |||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
− | *** | + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
− | * | + | * [[RXN-12196]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
− | *** | + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
− | * | + | * [[RXN0-5462]] |
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
− | *** | + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
</div> | </div> | ||
− | == Pathway(s) | + | == Pathway(s) associated == |
− | * [[PWY- | + | * [[PWY-6797]] |
− | ** ''' | + | ** '''3''' reactions found over '''7''' reactions in the full pathway |
− | + | * [[PWY-6147]] | |
− | * | + | ** '''5''' reactions found over '''5''' reactions in the full pathway |
− | * | + | * [[PWY-7539]] |
− | * | + | ** '''4''' reactions found over '''5''' reactions in the full pathway |
− | + | * [[PWY-7210]] | |
− | {{#set: direction= | + | ** '''8''' reactions found over '''8''' reactions in the full pathway |
− | {{#set: | + | * [[PWY-7198]] |
− | {{#set: | + | ** '''6''' reactions found over '''7''' reactions in the full pathway |
− | {{#set: | + | * [[PWY-7184]] |
− | {{#set: | + | ** '''9''' reactions found over '''9''' reactions in the full pathway |
− | {{#set: | + | * [[PWY-6545]] |
− | {{#set: | + | ** '''8''' reactions found over '''9''' reactions in the full pathway |
− | + | {{#set: transcription-direction=negative}} | |
− | + | {{#set: right-end-position=60314}} | |
+ | {{#set: left-end-position=13329}} | ||
+ | {{#set: centisome-position=18.867844 }} | ||
+ | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
+ | {{#set: nb reaction associated=8}} | ||
+ | {{#set: nb pathway associated=7}} |
Revision as of 09:28, 27 August 2019
Contents
Gene SJ07135
- transcription-direction:
- negative
- right-end-position:
- 60314
- left-end-position:
- 13329
- centisome-position:
- 18.867844
Organism(s) associated with this gene
Reaction(s) associated
- ATPASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- NUCLEOSIDE-TRIPHOSPHATASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-11135
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-12195
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-12196
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN0-5462
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-6797
- 3 reactions found over 7 reactions in the full pathway
- PWY-6147
- 5 reactions found over 5 reactions in the full pathway
- PWY-7539
- 4 reactions found over 5 reactions in the full pathway
- PWY-7210
- 8 reactions found over 8 reactions in the full pathway
- PWY-7198
- 6 reactions found over 7 reactions in the full pathway
- PWY-7184
- 9 reactions found over 9 reactions in the full pathway
- PWY-6545
- 8 reactions found over 9 reactions in the full pathway