Difference between revisions of "5.3.4.1-RXN"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=HEME-BIOSYNTHESIS-II HEME-BIOSYNTHESIS-II] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAG...")
(Created page with "Category:reaction == Reaction 5.3.4.1-RXN == * direction: ** reversible * common-name: ** protein disulfide isomerase * ec-number: ** [http://enzyme.expasy.org/EC/5.3.4.1...")
 
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=HEME-BIOSYNTHESIS-II HEME-BIOSYNTHESIS-II] ==
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== Reaction 5.3.4.1-RXN ==
−
* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-2 tax-2]
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** reversible
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-2759 tax-2759]
 
 
* common-name:
 
* common-name:
−
** heme b biosynthesis i (aerobic)
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** protein disulfide isomerase
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== Reaction(s) found ==
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* ec-number:
−
* [[PROTOHEMEFERROCHELAT-RXN]]
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** [http://enzyme.expasy.org/EC/5.3.4.1 ec-5.3.4.1]
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* [[PROTOPORGENOXI-RXN]]
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== Reaction formula ==
−
* [[RXN0-1461]]
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* 1 [[Proteins-with-incorrect-disulfides]][c] '''<=>''' 1 [[Proteins-with-correct-disulfides]][c]
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* [[UROGENDECARBOX-RXN]]
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== Gene(s) associated with this reaction  ==
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== Reaction(s) not found ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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All reactions of this pathways are in present
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* Gene: [[SJ17411]]
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{{#set: taxonomic-range=tax-2759|tax-2}}
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** Category: [[annotation]]
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{{#set: common-name=heme b biosynthesis i (aerobic)}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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{{#set: nb reaction found=4}}
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* Gene: [[SJ11283]]
−
{{#set: completion rate=1.0}}
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** Category: [[annotation]]
−
{{#set: nb total reaction=4}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ17455]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ02706]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ09446]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ08265]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ13150]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ09445]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ16659]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ08165]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ07095]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ13009]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ06720]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ16004]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
</div>
 +
== Pathway(s) ==
 +
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
== External links  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* METANETX-RXN : MNXR115628
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P13667 P13667]
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** [http://www.uniprot.org/uniprot/P11598 P11598]
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** [http://www.uniprot.org/uniprot/P21195 P21195]
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** [http://www.uniprot.org/uniprot/P0AEG4 P0AEG4]
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** [http://www.uniprot.org/uniprot/P29828 P29828]
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** [http://www.uniprot.org/uniprot/P32557 P32557]
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** [http://www.uniprot.org/uniprot/Q27780 Q27780]
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** [http://www.uniprot.org/uniprot/P31810 P31810]
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** [http://www.uniprot.org/uniprot/Q9PDE2 Q9PDE2]
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** [http://www.uniprot.org/uniprot/O27777 O27777]
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** [http://www.uniprot.org/uniprot/Q9JSN7 Q9JSN7]
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** [http://www.uniprot.org/uniprot/P45111 P45111]
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** [http://www.uniprot.org/uniprot/P0AEG6 P0AEG6]
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** [http://www.uniprot.org/uniprot/O68904 O68904]
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** [http://www.uniprot.org/uniprot/Q9PCE7 Q9PCE7]
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** [http://www.uniprot.org/uniprot/Q9PDF5 Q9PDF5]
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** [http://www.uniprot.org/uniprot/Q9JSY5 Q9JSY5]
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** [http://www.uniprot.org/uniprot/Q9KPF0 Q9KPF0]
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** [http://www.uniprot.org/uniprot/P95460 P95460]
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** [http://www.uniprot.org/uniprot/P05307 P05307]
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** [http://www.uniprot.org/uniprot/P17967 P17967]
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** [http://www.uniprot.org/uniprot/P09102 P09102]
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** [http://www.uniprot.org/uniprot/P07237 P07237]
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** [http://www.uniprot.org/uniprot/P08003 P08003]
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** [http://www.uniprot.org/uniprot/Q922C8 Q922C8]
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** [http://www.uniprot.org/uniprot/P04785 P04785]
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** [http://www.uniprot.org/uniprot/P55059 P55059]
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** [http://www.uniprot.org/uniprot/Q27553 Q27553]
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** [http://www.uniprot.org/uniprot/P30101 P30101]
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** [http://www.uniprot.org/uniprot/Q7M1Q4 Q7M1Q4]
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** [http://www.uniprot.org/uniprot/Q04815 Q04815]
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** [http://www.uniprot.org/uniprot/P39691 P39691]
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** [http://www.uniprot.org/uniprot/P34329 P34329]
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** [http://www.uniprot.org/uniprot/Q12730 Q12730]
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** [http://www.uniprot.org/uniprot/Q43116 Q43116]
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** [http://www.uniprot.org/uniprot/Q9TWZ1 Q9TWZ1]
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** [http://www.uniprot.org/uniprot/P52588 P52588]
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** [http://www.uniprot.org/uniprot/Q17967 Q17967]
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** [http://www.uniprot.org/uniprot/P52234 P52234]
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** [http://www.uniprot.org/uniprot/O22263 O22263]
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** [http://www.uniprot.org/uniprot/P93358 P93358]
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** [http://www.uniprot.org/uniprot/P80284 P80284]
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** [http://www.uniprot.org/uniprot/P52589 P52589]
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** [http://www.uniprot.org/uniprot/O48949 O48949]
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** [http://www.uniprot.org/uniprot/P38661 P38661]
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** [http://www.uniprot.org/uniprot/O13704 O13704]
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** [http://www.uniprot.org/uniprot/O13811 O13811]
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** [http://www.uniprot.org/uniprot/Q10057 Q10057]
 +
** [http://www.uniprot.org/uniprot/Q92249 Q92249]
 +
</div>
 +
{{#set: direction=reversible}}
 +
{{#set: common-name=protein disulfide isomerase}}
 +
{{#set: ec-number=ec-5.3.4.1}}
 +
{{#set: nb gene associated=14}}
 +
{{#set: nb pathway associated=0}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction tool=pathwaytools|pantograph}}
 +
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:24, 18 March 2021

Reaction 5.3.4.1-RXN

  • direction:
    • reversible
  • common-name:
    • protein disulfide isomerase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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