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| − | [[Category:reaction]] | + | [[Category:metabolite]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1461 RXN0-1461] == | + | == Metabolite 6-PYRUVOYL-5678-TETRAHYDROPTERIN == |
| − | * direction:
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| − | ** left-to-right
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| | * common-name: | | * common-name: |
| − | ** coproporphyrinogen oxidase | + | ** (6r)-6-pyruvoyl-5,6,7,8-tetrahydropterin |
| − | ** coproporphyrinogen iii oxidase | + | * smiles: |
| − | * ec-number:
| + | ** cc(=o)c(=o)[ch]1(cnc2(n=c(n)nc(=o)c(n1)=2)) |
| − | ** [http://enzyme.expasy.org/EC/1.3.3.3 ec-1.3.3.3] | + | * inchi-key: |
| − | == Reaction formula == | + | ** wbjzxbuveczhce-scsaibsysa-n |
| − | * 1 [[COPROPORPHYRINOGEN_III]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 2 [[PROTON]][c] '''=>''' 2 [[CARBON-DIOXIDE]][c] '''+''' 1 [[PROTOPORPHYRINOGEN]][c] '''+''' 2 [[WATER]][c]
| + | * molecular-weight: |
| − | == Gene(s) associated with this reaction ==
| + | ** 237.218 |
| − | * Gene: [[SJ11059]] | + | == Reaction(s) known to consume the compound == |
| − | ** Category: [[annotation]] | + | * [[RXN-8853]] |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| + | == Reaction(s) known to produce the compound == |
| − | ** Category: [[orthology]]
| + | * [[4.2.3.12-RXN]] |
| − | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| + | == Reaction(s) of unknown directionality == |
| − | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | + | {{#set: common-name=(6r)-6-pyruvoyl-5,6,7,8-tetrahydropterin}} |
| − | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| + | {{#set: inchi-key=inchikey=wbjzxbuveczhce-scsaibsysa-n}} |
| − | * Gene: [[SJ05457]]
| + | {{#set: molecular-weight=237.218}} |
| − | ** Category: [[annotation]]
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| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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| − | * Gene: [[SJ15840]] | |
| − | ** Category: [[annotation]] | |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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| − | == Pathway(s) == | |
| − | * [[PWY0-1415]], superpathway of heme b biosynthesis from uroporphyrinogen-III: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1415 PWY0-1415] | |
| − | ** '''5''' reactions found over '''4''' reactions in the full pathway
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| − | * [[CHLOROPHYLL-SYN]], 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent): [http://metacyc.org/META/NEW-IMAGE?object=CHLOROPHYLL-SYN CHLOROPHYLL-SYN]
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| − | ** '''6''' reactions found over '''9''' reactions in the full pathway
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| − | * [[PWY-7159]], 3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7159 PWY-7159]
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| − | ** '''5''' reactions found over '''9''' reactions in the full pathway
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| − | * [[HEME-BIOSYNTHESIS-II]], heme b biosynthesis I (aerobic): [http://metacyc.org/META/NEW-IMAGE?object=HEME-BIOSYNTHESIS-II HEME-BIOSYNTHESIS-II]
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| − | ** '''4''' reactions found over '''4''' reactions in the full pathway
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| − | == Reconstruction information ==
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| − | * category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | |
| − | * category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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| − | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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| − | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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| − | == External links == | |
| − | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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| − | * RHEA:
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| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18258 18258]
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| − | * LIGAND-RXN:
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| − | ** [http://www.genome.jp/dbget-bin/www_bget?R03220 R03220]
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| − | * UNIPROT:
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| − | ** [http://www.uniprot.org/uniprot/Q9RLE1 Q9RLE1]
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| − | ** [http://www.uniprot.org/uniprot/P36552 P36552]
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| − | ** [http://www.uniprot.org/uniprot/O25376 O25376]
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| − | ** [http://www.uniprot.org/uniprot/P36553 P36553]
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| − | ** [http://www.uniprot.org/uniprot/P33771 P33771]
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| − | ** [http://www.uniprot.org/uniprot/P43899 P43899]
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| − | ** [http://www.uniprot.org/uniprot/O25824 O25824]
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| − | ** [http://www.uniprot.org/uniprot/P54304 P54304]
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| − | ** [http://www.uniprot.org/uniprot/P11353 P11353]
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| − | ** [http://www.uniprot.org/uniprot/Q8X8G8 Q8X8G8]
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| − | ** [http://www.uniprot.org/uniprot/Q9ZC86 Q9ZC86]
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| − | ** [http://www.uniprot.org/uniprot/P36551 P36551]
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| − | ** [http://www.uniprot.org/uniprot/P35055 P35055]
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| − | ** [http://www.uniprot.org/uniprot/P43898 P43898]
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| − | ** [http://www.uniprot.org/uniprot/P72848 P72848]
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| − | ** [http://www.uniprot.org/uniprot/P73245 P73245]
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| − | ** [http://www.uniprot.org/uniprot/P74132 P74132]
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| − | ** [http://www.uniprot.org/uniprot/Q51676 Q51676]
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| − | ** [http://www.uniprot.org/uniprot/Q42946 Q42946]
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| − | ** [http://www.uniprot.org/uniprot/Q42840 Q42840]
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| − | ** [http://www.uniprot.org/uniprot/Q39581 Q39581]
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| − | ** [http://www.uniprot.org/uniprot/P95651 P95651]
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| − | ** [http://www.uniprot.org/uniprot/Q9RFG1 Q9RFG1]
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| − | </div>
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| − | {{#set: direction=left-to-right}}
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| − | {{#set: common-name=coproporphyrinogen oxidase|coproporphyrinogen iii oxidase}} | |
| − | {{#set: ec-number=ec-1.3.3.3}}
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| − | {{#set: nb gene associated=3}} | |
| − | {{#set: nb pathway associated=4}}
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| − | {{#set: reconstruction category=annotation|orthology}} | |
| − | {{#set: reconstruction tool=pantograph|pathwaytools}}
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| − | {{#set: reconstruction comment=n.a}}
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| − | {{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}}
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