Difference between revisions of "6.2.1.34-RXN"

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(Created page with "Category:reaction == Reaction RXN-7954 == * direction: ** left-to-right * common-name: ** [chondroitin]-n-acetylgalactosamine 4-sulfate 6-o-sulfotransferase * ec-number: *...")
(Created page with "Category:reaction == Reaction 6.2.1.34-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/6.2.1.34 ec-6.2.1.34] == Reaction formula == * 1 [...")
 
(2 intermediate revisions by one other user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-7954 ==
+
== Reaction 6.2.1.34-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** [chondroitin]-n-acetylgalactosamine 4-sulfate 6-o-sulfotransferase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.8.2.33 ec-2.8.2.33]
+
** [http://enzyme.expasy.org/EC/6.2.1.34 ec-6.2.1.34]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CHONDROITIN-4-SULFATE]][c] '''+''' 1 [[PAPS]][c] '''=>''' 1 [[3-5-ADP]][c] '''+''' 1 [[CHONDROITIN-46-DISULFATE]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[FERULIC-ACID]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[FERULOYL-COA]][c] '''+''' 1 [[PPI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ21107]]
+
* Gene: [[SJ03066]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ16901]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6567]], chondroitin sulfate biosynthesis (late stages):
+
* [[PWY-6343]], ferulate degradation:
−
** '''2''' reactions found over '''5''' reactions in the full pathway
+
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-1121]], suberin monomers biosynthesis:
 +
** '''9''' reactions found over '''20''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR99582
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=36252 36252]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R02194 R02194]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=[chondroitin]-n-acetylgalactosamine 4-sulfate 6-o-sulfotransferase}}
+
{{#set: ec-number=ec-6.2.1.34}}
−
{{#set: ec-number=ec-2.8.2.33}}
+
{{#set: nb gene associated=2}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb pathway associated=2}}
−
{{#set: nb pathway associated=1}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction tool=pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}

Latest revision as of 11:18, 18 March 2021

Reaction 6.2.1.34-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6343, ferulate degradation:
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-1121, suberin monomers biosynthesis:
    • 9 reactions found over 20 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR99582
  • RHEA:
  • LIGAND-RXN:





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