Difference between revisions of "6PFRUCTPHOS-RXN"

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(Created page with "Category:reaction == Reaction RXN-17947 == * direction: ** left-to-right * common-name: ** nucleotidase * ec-number: ** [http://enzyme.expasy.org/EC/3.1.3.31 ec-3.1.3.31]...")
(Created page with "Category:reaction == Reaction 6PFRUCTPHOS-RXN == * direction: ** left-to-right * common-name: ** 6-phosphofructokinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7.1.1...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-17947 ==
+
== Reaction 6PFRUCTPHOS-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** nucleotidase
+
** 6-phosphofructokinase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.1.3.31 ec-3.1.3.31]
+
** [http://enzyme.expasy.org/EC/2.7.1.11 ec-2.7.1.11]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[3-Prime-Nucleoside-Monophosphates]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Nucleosides]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[FRUCTOSE-6P]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[FRUCTOSE-16-DIPHOSPHATE]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* Gene: [[SJ09030]]
+
* Gene: [[SJ02434]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ11258]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ01133]]
+
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
** Category: [[annotation]]
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
* Gene: [[SJ04582]]
−
* Gene: [[SJ16098]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ04753]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ18895]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ15366]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ05836]]
+
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
** Category: [[annotation]]
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
* Gene: [[SJ16394]]
−
* Gene: [[SJ04752]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ18402]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
</div>
 
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-1861]], formaldehyde assimilation II (assimilatory RuMP Cycle):
 +
** '''7''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-5484]], glycolysis II (from fructose 6-phosphate):
 +
** '''10''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-1042]], glycolysis IV:
 +
** '''9''' reactions found over '''10''' reactions in the full pathway
 +
* [[GLYCOLYSIS]], glycolysis I (from glucose 6-phosphate):
 +
** '''11''' reactions found over '''12''' reactions in the full pathway
 +
* [[PWY-7385]], 1,3-propanediol biosynthesis (engineered):
 +
** '''7''' reactions found over '''9''' reactions in the full pathway
 +
* [[ANAGLYCOLYSIS-PWY]], glycolysis III (from glucose):
 +
** '''10''' reactions found over '''11''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR121290
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* METANETX-RXN : MNXR102513
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16110 16110]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00756 R00756]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q7M3F7 Q7M3F7]
 +
** [http://www.uniprot.org/uniprot/Q7M4J2 Q7M4J2]
 +
** [http://www.uniprot.org/uniprot/P12382 P12382]
 +
** [http://www.uniprot.org/uniprot/Q27665 Q27665]
 +
** [http://www.uniprot.org/uniprot/P52034 P52034]
 +
** [http://www.uniprot.org/uniprot/Q7M4K9 Q7M4K9]
 +
** [http://www.uniprot.org/uniprot/P43863 P43863]
 +
** [http://www.uniprot.org/uniprot/P20275 P20275]
 +
** [http://www.uniprot.org/uniprot/P47457 P47457]
 +
** [http://www.uniprot.org/uniprot/Q01813 Q01813]
 +
** [http://www.uniprot.org/uniprot/Q07636 Q07636]
 +
** [http://www.uniprot.org/uniprot/P16861 P16861]
 +
** [http://www.uniprot.org/uniprot/P16862 P16862]
 +
** [http://www.uniprot.org/uniprot/P00512 P00512]
 +
** [http://www.uniprot.org/uniprot/P0A796 P0A796]
 +
** [http://www.uniprot.org/uniprot/P06999 P06999]
 +
** [http://www.uniprot.org/uniprot/P08237 P08237]
 +
** [http://www.uniprot.org/uniprot/P00511 P00511]
 +
** [http://www.uniprot.org/uniprot/P70927 P70927]
 +
** [http://www.uniprot.org/uniprot/Q7M3F5 Q7M3F5]
 +
** [http://www.uniprot.org/uniprot/Q9TWY0 Q9TWY0]
 +
** [http://www.uniprot.org/uniprot/P30835 P30835]
 +
** [http://www.uniprot.org/uniprot/Q03215 Q03215]
 +
** [http://www.uniprot.org/uniprot/Q03216 Q03216]
 +
** [http://www.uniprot.org/uniprot/P80019 P80019]
 +
** [http://www.uniprot.org/uniprot/Q59214 Q59214]
 +
** [http://www.uniprot.org/uniprot/Q27705 Q27705]
 +
** [http://www.uniprot.org/uniprot/P75476 P75476]
 +
** [http://www.uniprot.org/uniprot/P72830 P72830]
 +
** [http://www.uniprot.org/uniprot/Q55988 Q55988]
 +
** [http://www.uniprot.org/uniprot/Q49084 Q49084]
 +
** [http://www.uniprot.org/uniprot/O08333 O08333]
 +
</div>
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=nucleotidase}}
+
{{#set: common-name=6-phosphofructokinase}}
−
{{#set: ec-number=ec-3.1.3.31}}
+
{{#set: ec-number=ec-2.7.1.11}}
−
{{#set: nb gene associated=10}}
+
{{#set: nb gene associated=3}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=6}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}}

Latest revision as of 11:19, 18 March 2021

Reaction 6PFRUCTPHOS-RXN

  • direction:
    • left-to-right
  • common-name:
    • 6-phosphofructokinase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-1861, formaldehyde assimilation II (assimilatory RuMP Cycle):
    • 7 reactions found over 9 reactions in the full pathway
  • PWY-5484, glycolysis II (from fructose 6-phosphate):
    • 10 reactions found over 11 reactions in the full pathway
  • PWY-1042, glycolysis IV:
    • 9 reactions found over 10 reactions in the full pathway
  • GLYCOLYSIS, glycolysis I (from glucose 6-phosphate):
    • 11 reactions found over 12 reactions in the full pathway
  • PWY-7385, 1,3-propanediol biosynthesis (engineered):
    • 7 reactions found over 9 reactions in the full pathway
  • ANAGLYCOLYSIS-PWY, glycolysis III (from glucose):
    • 10 reactions found over 11 reactions in the full pathway

Reconstruction information

External links





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