Difference between revisions of "6PGLUCONDEHYDROG-RXN"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7839 PWY-7839] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-33208 tax-3...")
(Created page with "Category:reaction == Reaction TREHALOSEPHOSPHA-RXN == * direction: ** left-to-right * common-name: ** trehalose-6-phosphate phosphatase * ec-number: ** [http://enzyme.expa...")
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7839 PWY-7839] ==
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== Reaction TREHALOSEPHOSPHA-RXN ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-33208 tax-33208]
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** left-to-right
 
* common-name:
 
* common-name:
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** lacto-series glycosphingolipids biosynthesis
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** trehalose-6-phosphate phosphatase
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== Reaction(s) found ==
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* ec-number:
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* [[GALACTOSIDE-2-L-FUCOSYLTRANSFERASE-RXN]]
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** [http://enzyme.expasy.org/EC/3.1.3.12 ec-3.1.3.12]
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== Reaction(s) not found ==
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== Reaction formula ==
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* [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.86-RXN 2.4.1.86-RXN]
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* 1 [[TREHALOSE-6P]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[TREHALOSE]][c]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-18309 RXN-18309]
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== Gene(s) associated with this reaction  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=CERAMIDE-GLUCOSYLTRANSFERASE-RXN CERAMIDE-GLUCOSYLTRANSFERASE-RXN]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-18310 RXN-18310]
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* Gene: [[SJ08873]]
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* [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.206-RXN 2.4.1.206-RXN]
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** Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12119 RXN-12119]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: taxonomic-range=tax-33208}}
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** Category: [[orthology]]
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{{#set: common-name=lacto-series glycosphingolipids biosynthesis}}
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: nb reaction found=1}}
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: completion rate=0.14}}
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* Gene: [[SJ07303]]
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{{#set: nb total reaction=7}}
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ18387]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ21183]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ21324]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ21325]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ18485]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ13486]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ17025]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ10128]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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</div>
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== Pathway(s) ==
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* [[PWY-7900]], glycogen biosynthesis III (from &alpha;-maltose 1-phosphate):
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** '''2''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-881]], trehalose biosynthesis II:
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[TREHALOSESYN-PWY]], trehalose biosynthesis III:
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[TRESYN-PWY]], trehalose biosynthesis I:
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== External links  ==
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R02778 R02778]
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23420 23420]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P31678 P31678]
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** [http://www.uniprot.org/uniprot/P31688 P31688]
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** [http://www.uniprot.org/uniprot/Q00786 Q00786]
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** [http://www.uniprot.org/uniprot/P78875 P78875]
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** [http://www.uniprot.org/uniprot/O64896 O64896]
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** [http://www.uniprot.org/uniprot/O64897 O64897]
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{{#set: direction=left-to-right}}
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{{#set: common-name=trehalose-6-phosphate phosphatase}}
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{{#set: ec-number=ec-3.1.3.12}}
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{{#set: nb gene associated=10}}
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{{#set: nb pathway associated=4}}
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{{#set: reconstruction category=annotation|orthology}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana}}

Revision as of 20:46, 18 December 2020

Reaction TREHALOSEPHOSPHA-RXN

  • direction:
    • left-to-right
  • common-name:
    • trehalose-6-phosphate phosphatase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7900, glycogen biosynthesis III (from α-maltose 1-phosphate):
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-881, trehalose biosynthesis II:
    • 1 reactions found over 2 reactions in the full pathway
  • TREHALOSESYN-PWY, trehalose biosynthesis III:
    • 1 reactions found over 2 reactions in the full pathway
  • TRESYN-PWY, trehalose biosynthesis I:
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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