Difference between revisions of "A-GALACTOSYLCERAMIDE"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARGINASE-RXN ARGINASE-RXN] == * direction: ** reversible * common-name: ** arginase * ec-number: **...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.46-RXN 2.4.1.46-RXN] == * direction: ** left-to-right * common-name: ** 1,2-diacylglycerol 3-...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARGINASE-RXN ARGINASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.46-RXN 2.4.1.46-RXN] ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** arginase
+
** 1,2-diacylglycerol 3-beta-galactosyltransferase
 +
** monogalactosyldiacylglycerol synthase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.5.3.1 ec-3.5.3.1]
+
** [http://enzyme.expasy.org/EC/2.4.1.46 ec-2.4.1.46]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ARG]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[L-ORNITHINE]][c] '''+''' 1 [[UREA]][c]
+
* 1 [[CPD-14553]][c] '''+''' 1 [[DIACYLGLYCEROL]][c] '''=>''' 1 [[D-Galactosyl-12-diacyl-glycerols]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UDP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ12906]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ11730]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ01255]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ14527]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ00773]]
+
* Gene: [[SJ02446]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6922]], L-N&delta;-acetylornithine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6922 PWY-6922]
+
* [[PWY-401]], galactolipid biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-401 PWY-401]
−
** '''5''' reactions found over '''7''' reactions in the full pathway
+
** '''2''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-4984]], urea cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4984 PWY-4984]
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
* [[ARG-GLU-PWY]], L-arginine degradation VII (arginase 3 pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARG-GLU-PWY ARG-GLU-PWY]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-6305]], putrescine biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6305 PWY-6305]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
* [[ARG-PRO-PWY]], L-arginine degradation VI (arginase 2 pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARG-PRO-PWY ARG-PRO-PWY]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[ARGASEDEG-PWY]], L-arginine degradation I (arginase pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARGASEDEG-PWY ARGASEDEG-PWY]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[CITRULBIO-PWY]], L-citrulline biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=CITRULBIO-PWY CITRULBIO-PWY]
 
−
** '''7''' reactions found over '''8''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20572 20572]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14946 14946]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00551 R00551]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02691 R02691]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P05089 P05089]
+
** [http://www.uniprot.org/uniprot/O81770 O81770]
−
** [http://www.uniprot.org/uniprot/P07824 P07824]
+
** [http://www.uniprot.org/uniprot/P93115 P93115]
−
** [http://www.uniprot.org/uniprot/P40906 P40906]
+
** [http://www.uniprot.org/uniprot/O82730 O82730]
−
** [http://www.uniprot.org/uniprot/Q7M0Z3 Q7M0Z3]
+
{{#set: direction=left-to-right}}
−
** [http://www.uniprot.org/uniprot/P14012 P14012]
+
{{#set: common-name=1,2-diacylglycerol 3-beta-galactosyltransferase|monogalactosyldiacylglycerol synthase}}
−
** [http://www.uniprot.org/uniprot/P37818 P37818]
+
{{#set: ec-number=ec-2.4.1.46}}
−
** [http://www.uniprot.org/uniprot/P49900 P49900]
+
{{#set: nb gene associated=4}}
−
** [http://www.uniprot.org/uniprot/P39138 P39138]
+
{{#set: nb pathway associated=1}}
−
** [http://www.uniprot.org/uniprot/P53608 P53608]
 
−
** [http://www.uniprot.org/uniprot/P72703 P72703]
 
−
** [http://www.uniprot.org/uniprot/O68051 O68051]
 
−
** [http://www.uniprot.org/uniprot/O49046 O49046]
 
−
** [http://www.uniprot.org/uniprot/O76895 O76895]
 
−
** [http://www.uniprot.org/uniprot/P33280 P33280]
 
−
** [http://www.uniprot.org/uniprot/Q10066 Q10066]
 
−
** [http://www.uniprot.org/uniprot/P00812 P00812]
 
−
</div>
 
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=arginase}}
 
−
{{#set: ec-number=ec-3.5.3.1}}
 
−
{{#set: nb gene associated=2}}
 
−
{{#set: nb pathway associated=7}}
 
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
 
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Revision as of 14:24, 26 August 2019

Reaction 2.4.1.46-RXN

  • direction:
    • left-to-right
  • common-name:
    • 1,2-diacylglycerol 3-beta-galactosyltransferase
    • monogalactosyldiacylglycerol synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-401, galactolipid biosynthesis I: PWY-401
    • 2 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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