Difference between revisions of "ABC-25-RXN"

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(Created page with "Category:reaction == Reaction RXN3O-4113 == * direction: ** left-to-right * common-name: ** alcohol dehydrogenase (nad) ** tyrosol dehydrogenase * ec-number: ** [http://en...")
(Created page with "Category:reaction == Reaction PSERTRANSAMPYR-RXN == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/2.6.1.52 ec-2.6.1.52] == Reaction formula == *...")
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction RXN3O-4113 ==
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== Reaction PSERTRANSAMPYR-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
−
* common-name:
 
−
** alcohol dehydrogenase (nad)
 
−
** tyrosol dehydrogenase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.1.1.1 ec-1.1.1.1]
+
** [http://enzyme.expasy.org/EC/2.6.1.52 ec-2.6.1.52]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[HYDRPHENYLAC-CPD]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD3O-4151]][c] '''+''' 1 [[NAD]][c]
+
* 1 [[3OH-4P-OH-ALPHA-KETOBUTYRATE]][c] '''+''' 1 [[GLT]][c] '''<=>''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[4-PHOSPHONOOXY-THREONINE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ21601]]
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* Gene: [[SJ02143]]
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** Category: [[annotation]]
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** Category: [[orthology]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ07759]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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* Gene: [[SJ14768]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6802]], salidroside biosynthesis:
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* [[PYRIDOXSYN-PWY]], pyridoxal 5'-phosphate biosynthesis I:
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** '''3''' reactions found over '''4''' reactions in the full pathway
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** '''3''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY3O-4108]], L-tyrosine degradation III:
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16576 16576]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R04304 R04304]
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** [http://www.genome.jp/dbget-bin/www_bget?R05085 R05085]
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{{#set: direction=left-to-right}}
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{{#set: direction=reversible}}
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{{#set: common-name=alcohol dehydrogenase (nad)|tyrosol dehydrogenase}}
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{{#set: ec-number=ec-2.6.1.52}}
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{{#set: ec-number=ec-1.1.1.1}}
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{{#set: nb gene associated=1}}
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{{#set: nb gene associated=3}}
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{{#set: nb pathway associated=1}}
−
{{#set: nb pathway associated=2}}
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{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction tool=pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}

Revision as of 11:27, 15 January 2021

Reaction PSERTRANSAMPYR-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PYRIDOXSYN-PWY, pyridoxal 5'-phosphate biosynthesis I:
    • 3 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





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