Difference between revisions of "ABC-25-RXN"

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(Created page with "Category:reaction == Reaction RXN-12303 == * direction: ** reversible * common-name: ** nad(p)h dehydrogenase (plastoquinone) ** nad(p)h dehydrogenase (quinone) ** nad(p)h...")
(Created page with "Category:reaction == Reaction RXN-13431 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1 ec-2.3.1] == Reaction formula == * 1 ACETYL-C...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-12303 ==
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== Reaction RXN-13431 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
−
* common-name:
 
−
** nad(p)h dehydrogenase (plastoquinone)
 
−
** nad(p)h dehydrogenase (quinone)
 
−
** nad(p)h: plastoquinone dehydrogenase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.6.5.2 ec-1.6.5.2]
+
** [http://enzyme.expasy.org/EC/2.3.1 ec-2.3.1]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[PLASTOQUINONE]][c] '''+''' 1 [[PROTON]][c] '''<=>''' 1 [[NAD-P-OR-NOP]][c] '''+''' 1 [[Plastoquinols]][c]
+
* 1 [[ACETYL-COA]][c] '''+''' 9 [[MALONYL-COA]][c] '''+''' 13 [[NADPH]][c] '''+''' 21 [[PROTON]][c] '''=>''' 1 [[5Z8Z11Z14Z17Z-EICOSAPENTAENOATE]][c] '''+''' 9 [[CARBON-DIOXIDE]][c] '''+''' 10 [[CO-A]][c] '''+''' 13 [[NADP]][c] '''+''' 8 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ18408]]
 
−
** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ17755]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7731]], superpathway of photosynthetic hydrogen production:
+
* [[PWY-7050]], icosapentaenoate biosynthesis IV (bacteria):
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** '''3''' reactions found over '''1''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[manual]]; source: [[previous_meneco]]; tool: [[curation]]; comment: reaction added with meneco (previous version)
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=left-to-right}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=42611 42611]
+
{{#set: ec-number=ec-2.3.1}}
−
{{#set: direction=reversible}}
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{{#set: nb gene associated=0}}
−
{{#set: common-name=nad(p)h dehydrogenase (quinone)|nad(p)h dehydrogenase (plastoquinone)|nad(p)h: plastoquinone dehydrogenase}}
 
−
{{#set: ec-number=ec-1.6.5.2}}
 
−
{{#set: nb gene associated=2}}
 
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=manual}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=curation}}
−
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction comment=reaction added with meneco (previous version)}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=previous_meneco}}

Revision as of 15:07, 5 January 2021

Reaction RXN-13431

  • direction:
    • left-to-right
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7050, icosapentaenoate biosynthesis IV (bacteria):
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=ABC-25-RXN&oldid=64663"