Difference between revisions of "ACACT4h"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.11.1-RXN 3.1.11.1-RXN] == * direction: ** left-to-right * common-name: ** exodeoxyribonuclease...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.2.1.58-RXN 4.2.1.58-RXN] == <div class="toccolours mw-collapsible mw-collapsed" style="width:100%...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.11.1-RXN 3.1.11.1-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.2.1.58-RXN 4.2.1.58-RXN] ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** exodeoxyribonuclease i
+
** (3r)-3-hydroxybutanoyl-[acyl-carrier-protein] hydratase
 +
** fatty acid synthase
 +
** (3r)-3-hydroxybutanoyl-[acyl-carrier protein] dehydratase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.1.11.1 ec-3.1.11.1]
+
** [http://enzyme.expasy.org/EC/2.3.1.86 ec-2.3.1.86]
 +
** [http://enzyme.expasy.org/EC/2.3.1.85 ec-2.3.1.85]
 +
** [http://enzyme.expasy.org/EC/4.2.1.59 ec-4.2.1.59]
 +
* synonymous:
 +
** enoyl acyl carrier protein hydrase
 +
** crotonyl acyl carrier protein hydratase
 +
** crotonoyl-[acyl-carrier-protein] hydratase
 +
** 3-hydroxybutyryl acyl carrier protein dehydratase
 +
** (3r)-3-hydroxybutanoyl-[acyl-carrier-protein] hydro-lyase
 +
** (3r)-3-hydroxybutanoyl-[acyl-carrier-protein] hydro-lyase (but-2-enoyl-[acyl-carrier protein]-forming)
 +
** &beta;-hydroxybutyryl acyl carrier protein dehydrase
 +
** &beta;-hydroxybutyryl acyl carrier  protein dehydrase
 +
** &beta;-hydroxybutyryl acyl carrier protein (acp) dehydrase
 +
</div>
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[DNA-N]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[DNA-N]][c] '''+''' 1 [[Deoxy-Ribonucleoside-Monophosphates]][c]
+
* 1 [[Beta-3-hydroxybutyryl-ACPs]][c] '''=>''' 1 [[Crotonyl-ACPs]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ04180]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ11672]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ19629]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ00320]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ04443]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ10624]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ15983]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ17743]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ10275]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ03883]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ00613]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ13014]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ06617]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ18059]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ06616]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ06944]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ04769]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
 +
** '''31''' reactions found over '''31''' reactions in the full pathway
 +
* [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994]
 +
** '''31''' reactions found over '''31''' reactions in the full pathway
 +
* [[PWY-7388]], octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7388 PWY-7388]
 +
** '''7''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* UNIPROT:
+
* LIGAND-RXN:
−
** [http://www.uniprot.org/uniprot/P45188 P45188]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04428 R04428]
−
** [http://www.uniprot.org/uniprot/P04995 P04995]
 
−
** [http://www.uniprot.org/uniprot/P53695 P53695]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=exodeoxyribonuclease i}}
+
{{#set: common-name=fatty acid synthase|(3r)-3-hydroxybutanoyl-[acyl-carrier-protein] hydratase|(3r)-3-hydroxybutanoyl-[acyl-carrier protein] dehydratase}}
−
{{#set: ec-number=ec-3.1.11.1}}
+
{{#set: ec-number=ec-2.3.1.86|ec-4.2.1.59|ec-2.3.1.85}}
−
{{#set: nb gene associated=1}}
+
{{#set: synonymous=enoyl acyl carrier protein hydrase|crotonyl acyl carrier protein hydratase|3-hydroxybutyryl acyl carrier protein dehydratase|crotonoyl-[acyl-carrier-protein] hydratase|&beta;-hydroxybutyryl acyl carrier protein (acp) dehydrase|&beta;-hydroxybutyryl acyl carrier protein dehydrase|(3r)-3-hydroxybutanoyl-[acyl-carrier-protein] hydro-lyase (but-2-enoyl-[acyl-carrier protein]-forming)|&beta;-hydroxybutyryl acyl carrier  protein dehydrase|(3r)-3-hydroxybutanoyl-[acyl-carrier-protein] hydro-lyase}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb gene associated=16}}
 +
{{#set: nb pathway associated=3}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 09:30, 27 August 2019

Reaction 4.2.1.58-RXN

  • direction:
    • left-to-right
  • common-name:
    • (3r)-3-hydroxybutanoyl-[acyl-carrier-protein] hydratase
    • fatty acid synthase
    • (3r)-3-hydroxybutanoyl-[acyl-carrier protein] dehydratase
  • ec-number:
  • synonymous:
    • enoyl acyl carrier protein hydrase
    • crotonyl acyl carrier protein hydratase
    • crotonoyl-[acyl-carrier-protein] hydratase
    • 3-hydroxybutyryl acyl carrier protein dehydratase
    • (3r)-3-hydroxybutanoyl-[acyl-carrier-protein] hydro-lyase
    • (3r)-3-hydroxybutanoyl-[acyl-carrier-protein] hydro-lyase (but-2-enoyl-[acyl-carrier protein]-forming)
    • β-hydroxybutyryl acyl carrier protein dehydrase
    • β-hydroxybutyryl acyl carrier protein dehydrase
    • β-hydroxybutyryl acyl carrier protein (acp) dehydrase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5971, palmitate biosynthesis II (bacteria and plants): PWY-5971
    • 31 reactions found over 31 reactions in the full pathway
  • PWY-5994, palmitate biosynthesis I (animals and fungi): PWY-5994
    • 31 reactions found over 31 reactions in the full pathway
  • PWY-7388, octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast): PWY-7388
    • 7 reactions found over 9 reactions in the full pathway

Reconstruction information

External links

  • Property "Common-name" (as page type) with input value "(3r)-3-hydroxybutanoyl-[acyl-carrier-protein] hydratase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
  • Property "Common-name" (as page type) with input value "(3r)-3-hydroxybutanoyl-[acyl-carrier protein] dehydratase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
  • Property "Synonymous" (as page type) with input value "crotonoyl-[acyl-carrier-protein] hydratase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
  • Property "Synonymous" (as page type) with input value "(3r)-3-hydroxybutanoyl-[acyl-carrier-protein] hydro-lyase (but-2-enoyl-[acyl-carrier protein]-forming)" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
  • Property "Synonymous" (as page type) with input value "(3r)-3-hydroxybutanoyl-[acyl-carrier-protein] hydro-lyase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.




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