Difference between revisions of "ACCOAtm"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5749 PWY-5749] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-33154 tax-3...")
(Created page with "Category:reaction == Reaction BUTYRYL-COA-DEHYDROGENASE-RXN == * direction: ** left-to-right * common-name: ** butanoyl-coa dehydrogenase * ec-number: ** [http://enzyme.ex...")
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5749 PWY-5749] ==
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== Reaction BUTYRYL-COA-DEHYDROGENASE-RXN ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-33154 tax-33154]
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** left-to-right
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-2 tax-2]
 
 
* common-name:
 
* common-name:
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** itaconate degradation
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** butanoyl-coa dehydrogenase
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== Reaction(s) found ==
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* ec-number:
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* [[RXN-8988]]
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** [http://enzyme.expasy.org/EC/1.3.8.1 ec-1.3.8.1]
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== Reaction(s) not found ==
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== Reaction formula ==
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* [http://metacyc.org/META/NEW-IMAGE?object=CITRAMALYL-COA-LYASE-RXN CITRAMALYL-COA-LYASE-RXN]
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* 1 [[CROTONYL-COA]][c] '''+''' 1 [[ETF-Reduced]][c] '''=>''' 1 [[BUTYRYL-COA]][c] '''+''' 1 [[ETF-Oxidized]][c] '''+''' 1 [[PROTON]][c]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8987 RXN-8987]
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== Gene(s) associated with this reaction  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=ITACONYL-COA-HYDRATASE-RXN ITACONYL-COA-HYDRATASE-RXN]
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* Gene: [[SJ19669]]
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{{#set: taxonomic-range=tax-33154|tax-2}}
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** Category: [[annotation]]
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{{#set: common-name=itaconate degradation}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: nb reaction found=1}}
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== Pathway(s) ==
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{{#set: completion rate=0.25}}
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* [[PWY-6583]], pyruvate fermentation to butanol I:
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{{#set: nb total reaction=4}}
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** '''6''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-5022]], 4-aminobutanoate degradation V:
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** '''3''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-5676]], acetyl-CoA fermentation to butanoate II:
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** '''4''' reactions found over '''5''' reactions in the full pathway
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* [[P163-PWY]], L-lysine fermentation to acetate and butanoate:
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** '''3''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-5677]], succinate fermentation to butanoate:
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** '''1''' reactions found over '''7''' reactions in the full pathway
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* [[CENTFERM-PWY]], pyruvate fermentation to butanoate:
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** '''5''' reactions found over '''7''' reactions in the full pathway
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* [[P162-PWY]], L-glutamate degradation V (via hydroxyglutarate):
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** '''7''' reactions found over '''11''' reactions in the full pathway
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* [[P3-PWY]], gallate degradation III (anaerobic):
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** '''3''' reactions found over '''11''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== External links  ==
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24006 24006]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R01178 R01178]
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{{#set: direction=left-to-right}}
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{{#set: common-name=butanoyl-coa dehydrogenase}}
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{{#set: ec-number=ec-1.3.8.1}}
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{{#set: nb gene associated=1}}
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{{#set: nb pathway associated=8}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 20:45, 18 December 2020

Reaction BUTYRYL-COA-DEHYDROGENASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • butanoyl-coa dehydrogenase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6583, pyruvate fermentation to butanol I:
    • 6 reactions found over 8 reactions in the full pathway
  • PWY-5022, 4-aminobutanoate degradation V:
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-5676, acetyl-CoA fermentation to butanoate II:
    • 4 reactions found over 5 reactions in the full pathway
  • P163-PWY, L-lysine fermentation to acetate and butanoate:
    • 3 reactions found over 10 reactions in the full pathway
  • PWY-5677, succinate fermentation to butanoate:
    • 1 reactions found over 7 reactions in the full pathway
  • CENTFERM-PWY, pyruvate fermentation to butanoate:
    • 5 reactions found over 7 reactions in the full pathway
  • P162-PWY, L-glutamate degradation V (via hydroxyglutarate):
    • 7 reactions found over 11 reactions in the full pathway
  • P3-PWY, gallate degradation III (anaerobic):
    • 3 reactions found over 11 reactions in the full pathway

Reconstruction information

External links





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