Difference between revisions of "ACECOATRANS-RXN-CPD-196/ACET//CPD-195/ACETYL-COA.33."

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(Created page with "Category:reaction == Reaction RXN-2425 == * direction: ** reversible * common-name: ** 2,3-dehydroadipyl-coa hydratase ** enoyl-coa hydratase * ec-number: ** [http://enzym...")
(Created page with "Category:reaction == Reaction ACECOATRANS-RXN-CPD-196/ACET//CPD-195/ACETYL-COA.33. == * direction: ** left-to-right == Reaction formula == * 1.0 ACET[c] '''+''' 1.0 ...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction RXN-2425 ==
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== Reaction ACECOATRANS-RXN-CPD-196/ACET//CPD-195/ACETYL-COA.33. ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
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* common-name:
 
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** 2,3-dehydroadipyl-coa hydratase
 
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** enoyl-coa hydratase
 
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* ec-number:
 
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** [http://enzyme.expasy.org/EC/4.2.1.17 ec-4.2.1.17]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[3-HYDROXYADIPYL-COA]][c] '''<=>''' 1 [[TRANS-23-DEHYDROADIPYL-COA]][c] '''+''' 1 [[WATER]][c]
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* 1.0 [[ACET]][c] '''+''' 1.0 [[CPD-196]][c] '''=>''' 1.0 [[ACETYL-COA]][c] '''+''' 1.0 [[CPD-195]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
−
* Gene: [[SJ21390]]
 
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** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[SJ10275]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[SJ03913]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[SJ14591]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
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* Gene: [[SJ07211]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[SJ03584]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY0-321]], phenylacetate degradation I (aerobic):
 
−
** '''2''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-1361]], benzoyl-CoA degradation I (aerobic):
 
−
** '''2''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=left-to-right}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=34863 34863]
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{{#set: nb gene associated=0}}
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* LIGAND-RXN:
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{{#set: nb pathway associated=0}}
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** [http://www.genome.jp/dbget-bin/www_bget?R06942 R06942]
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{{#set: reconstruction category=gap-filling}}
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{{#set: direction=reversible}}
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{{#set: reconstruction tool=meneco}}
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{{#set: common-name=2,3-dehydroadipyl-coa hydratase|enoyl-coa hydratase}}
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{{#set: reconstruction comment=added for gapfilling}}
−
{{#set: ec-number=ec-4.2.1.17}}
+
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
−
{{#set: nb gene associated=6}}
 
−
{{#set: nb pathway associated=2}}
 
−
{{#set: reconstruction category=annotation|orthology}}
 
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
−
{{#set: reconstruction comment=n.a}}
 
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
 

Latest revision as of 11:23, 18 March 2021

Reaction ACECOATRANS-RXN-CPD-196/ACET//CPD-195/ACETYL-COA.33.

  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=ACECOATRANS-RXN-CPD-196/ACET//CPD-195/ACETYL-COA.33.&oldid=142359"