Difference between revisions of "ACECOATRANS-RXN-CPD-196/ACET//CPD-195/ACETYL-COA.33."
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(Created page with "Category:reaction == Reaction RXN-2425 == * direction: ** reversible * common-name: ** 2,3-dehydroadipyl-coa hydratase ** enoyl-coa hydratase * ec-number: ** [http://enzym...") |
(Created page with "Category:reaction == Reaction GLUTCYSLIG-RXN == * direction: ** left-to-right * common-name: ** glutamate-cysteine ligase * ec-number: ** [http://enzyme.expasy.org/EC/6.3....") |
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Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction RXN | + | == Reaction GLUTCYSLIG-RXN == |
* direction: | * direction: | ||
− | ** | + | ** left-to-right |
* common-name: | * common-name: | ||
− | ** | + | ** glutamate-cysteine ligase |
− | |||
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/6.3.2.2 ec-6.3.2.2] |
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[ATP]][c] '''+''' 1 [[CYS]][c] '''+''' 1 [[GLT]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[L-GAMMA-GLUTAMYLCYSTEINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | + | * Gene: [[SJ12601]] | |
− | * Gene: [[ | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
− | * Gene: [[ | + | * Gene: [[SJ19108]] |
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
− | *** Source: [[ | + | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
− | |||
− | |||
− | |||
− | |||
== Pathway(s) == | == Pathway(s) == | ||
− | + | * [[PWY-7255]], ergothioneine biosynthesis I (bacteria): | |
− | |||
− | * [[PWY- | ||
** '''2''' reactions found over '''7''' reactions in the full pathway | ** '''2''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[GLUTATHIONESYN-PWY]], glutathione biosynthesis: | ||
+ | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[PWY-6840]], homoglutathione biosynthesis: | ||
+ | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
− | |||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
− | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13286 13286] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
− | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R00894 R00894] |
− | {{#set: direction= | + | * UNIPROT: |
− | {{#set: common-name= | + | ** [http://www.uniprot.org/uniprot/P19468 P19468] |
− | {{#set: ec-number=ec- | + | ** [http://www.uniprot.org/uniprot/Q56277 Q56277] |
− | {{#set: nb gene associated= | + | ** [http://www.uniprot.org/uniprot/Q9JZI4 Q9JZI4] |
− | {{#set: nb pathway associated= | + | ** [http://www.uniprot.org/uniprot/Q9JU83 Q9JU83] |
+ | ** [http://www.uniprot.org/uniprot/P48507 P48507] | ||
+ | ** [http://www.uniprot.org/uniprot/P48506 P48506] | ||
+ | ** [http://www.uniprot.org/uniprot/P32477 P32477] | ||
+ | ** [http://www.uniprot.org/uniprot/P0A6W9 P0A6W9] | ||
+ | ** [http://www.uniprot.org/uniprot/O22493 O22493] | ||
+ | ** [http://www.uniprot.org/uniprot/P46309 P46309] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9TY17 Q9TY17] | ||
+ | ** [http://www.uniprot.org/uniprot/Q09768 Q09768] | ||
+ | {{#set: direction=left-to-right}} | ||
+ | {{#set: common-name=glutamate-cysteine ligase}} | ||
+ | {{#set: ec-number=ec-6.3.2.2}} | ||
+ | {{#set: nb gene associated=2}} | ||
+ | {{#set: nb pathway associated=3}} | ||
{{#set: reconstruction category=annotation|orthology}} | {{#set: reconstruction category=annotation|orthology}} | ||
{{#set: reconstruction tool=pathwaytools|pantograph}} | {{#set: reconstruction tool=pathwaytools|pantograph}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source= | + | {{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 15:36, 5 January 2021
Contents
Reaction GLUTCYSLIG-RXN
- direction:
- left-to-right
- common-name:
- glutamate-cysteine ligase
- ec-number:
Reaction formula
Gene(s) associated with this reaction
- Gene: SJ12601
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ19108
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-7255, ergothioneine biosynthesis I (bacteria):
- 2 reactions found over 7 reactions in the full pathway
- GLUTATHIONESYN-PWY, glutathione biosynthesis:
- 2 reactions found over 2 reactions in the full pathway
- PWY-6840, homoglutathione biosynthesis:
- 1 reactions found over 2 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links
- RHEA:
- LIGAND-RXN:
- UNIPROT: