Difference between revisions of "ACETOLACTSYN-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRIPHOSPHATASE-RXN TRIPHOSPHATASE-RXN] == * direction: ** left-to-right * common-name: ** triphosph...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=O-SUCCHOMOSERLYASE-RXN O-SUCCHOMOSERLYASE-RXN] == * direction: ** reversible * common-name: ** cyst...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRIPHOSPHATASE-RXN TRIPHOSPHATASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=O-SUCCHOMOSERLYASE-RXN O-SUCCHOMOSERLYASE-RXN] ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** triphosphatase
+
** cystathionine gamma-synthase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.6.1.25 ec-3.6.1.25]
+
** [http://enzyme.expasy.org/EC/2.5.1.48 ec-2.5.1.48]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[P3I]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[CYS]][c] '''+''' 1 [[O-SUCCINYL-L-HOMOSERINE]][c] '''<=>''' 1 [[L-CYSTATHIONINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[SUC]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ05217]]
+
* Gene: [[SJ05357]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ20026]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ05358]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[HOMOSER-METSYN-PWY]], L-methionine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=HOMOSER-METSYN-PWY HOMOSER-METSYN-PWY]
 +
** '''4''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-I9]], L-cysteine biosynthesis VI (from L-methionine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-I9 PWY-I9]
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-801]], homocysteine and cysteine interconversion: [http://metacyc.org/META/NEW-IMAGE?object=PWY-801 PWY-801]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14160 14160]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20397 20397]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00138 R00138]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03260 R03260]
−
{{#set: direction=left-to-right}}
+
* UNIPROT:
−
{{#set: common-name=triphosphatase}}
+
** [http://www.uniprot.org/uniprot/P0A4K2 P0A4K2]
−
{{#set: ec-number=ec-3.6.1.25}}
+
** [http://www.uniprot.org/uniprot/Q9CEC6 Q9CEC6]
−
{{#set: nb gene associated=1}}
+
** [http://www.uniprot.org/uniprot/P38675 P38675]
−
{{#set: nb pathway associated=0}}
+
** [http://www.uniprot.org/uniprot/P24601 P24601]
−
{{#set: reconstruction category=annotation}}
+
** [http://www.uniprot.org/uniprot/P00935 P00935]
−
{{#set: reconstruction tool=pathwaytools}}
+
** [http://www.uniprot.org/uniprot/O04981 O04981]
 +
** [http://www.uniprot.org/uniprot/O04982 O04982]
 +
** [http://www.uniprot.org/uniprot/O81334 O81334]
 +
** [http://www.uniprot.org/uniprot/Q79VD9 Q79VD9]
 +
{{#set: direction=reversible}}
 +
{{#set: common-name=cystathionine gamma-synthase}}
 +
{{#set: ec-number=ec-2.5.1.48}}
 +
{{#set: nb gene associated=3}}
 +
{{#set: nb pathway associated=3}}
 +
{{#set: reconstruction category=annotation|orthology}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome|output_pantograph_nannochloropsis_salina}}

Revision as of 09:31, 27 August 2019

Reaction O-SUCCHOMOSERLYASE-RXN

  • direction:
    • reversible
  • common-name:
    • cystathionine gamma-synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • HOMOSER-METSYN-PWY, L-methionine biosynthesis I: HOMOSER-METSYN-PWY
    • 4 reactions found over 7 reactions in the full pathway
  • PWY-I9, L-cysteine biosynthesis VI (from L-methionine): PWY-I9
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-801, homocysteine and cysteine interconversion: PWY-801
    • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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