Difference between revisions of "ACETYLHOMOSER-CYS-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=H2PTEROATESYNTH-RXN H2PTEROATESYNTH-RXN] == * direction: ** left-to-right * common-name: ** dihydro...")
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=LYSOPHOSPHOLIPASE-RXN LYSOPHOSPHOLIPASE-RXN] == * direction: ** left-to-right * common-name: ** lys...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=H2PTEROATESYNTH-RXN H2PTEROATESYNTH-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=LYSOPHOSPHOLIPASE-RXN LYSOPHOSPHOLIPASE-RXN] ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** dihydropteroate synthase
+
** lysophospholipase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.5.1.15 ec-2.5.1.15]
+
** [http://enzyme.expasy.org/EC/3.1.1.5 ec-3.1.1.5]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[DIHYDROPTERIN-CH2OH-PP]][c] '''+''' 1 [[P-AMINO-BENZOATE]][c] '''=>''' 1 [[7-8-DIHYDROPTEROATE]][c] '''+''' 1 [[PPI]][c]
+
* 1 [[2-Lysophosphatidylcholines]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Carboxylates]][c] '''+''' 1 [[L-1-GLYCERO-PHOSPHORYLCHOLINE]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ22398]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ04408]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ03124]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ19560]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ09511]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ21109]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ16853]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ16448]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ07752]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ06461]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ16427]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6614]], tetrahydrofolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6614 PWY-6614]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R02746 R02746]
 +
** [http://www.genome.jp/dbget-bin/www_bget?R07291 R07291]
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19950 19950]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15177 15177]
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R03067 R03067]
 
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P0AC11 P0AC11]
+
** [http://www.uniprot.org/uniprot/O07427 O07427]
−
** [http://www.uniprot.org/uniprot/P0AC13 P0AC13]
+
** [http://www.uniprot.org/uniprot/Q7M3V3 Q7M3V3]
−
** [http://www.uniprot.org/uniprot/Q05851 Q05851]
+
** [http://www.uniprot.org/uniprot/P07000 P07000]
−
** [http://www.uniprot.org/uniprot/Q25704 Q25704]
+
** [http://www.uniprot.org/uniprot/P0ADA1 P0ADA1]
−
** [http://www.uniprot.org/uniprot/P0A578 P0A578]
+
** [http://www.uniprot.org/uniprot/P39457 P39457]
−
** [http://www.uniprot.org/uniprot/O84619 O84619]
+
** [http://www.uniprot.org/uniprot/Q03674 Q03674]
−
** [http://www.uniprot.org/uniprot/P0C003 P0C003]
+
** [http://www.uniprot.org/uniprot/P53541 P53541]
−
** [http://www.uniprot.org/uniprot/Q9ZJZ4 Q9ZJZ4]
+
** [http://www.uniprot.org/uniprot/P78854 P78854]
−
** [http://www.uniprot.org/uniprot/Q9CGE2 Q9CGE2]
+
** [http://www.uniprot.org/uniprot/O42970 O42970]
−
** [http://www.uniprot.org/uniprot/Q9JT70 Q9JT70]
+
** [http://www.uniprot.org/uniprot/Q9P327 Q9P327]
−
** [http://www.uniprot.org/uniprot/P43776 P43776]
 
−
** [http://www.uniprot.org/uniprot/P64139 P64139]
 
−
** [http://www.uniprot.org/uniprot/Q9WXP7 Q9WXP7]
 
−
** [http://www.uniprot.org/uniprot/O67448 O67448]
 
−
** [http://www.uniprot.org/uniprot/P28822 P28822]
 
−
** [http://www.uniprot.org/uniprot/Q9Z7E8 Q9Z7E8]
 
−
** [http://www.uniprot.org/uniprot/P82602 P82602]
 
−
** [http://www.uniprot.org/uniprot/O25830 O25830]
 
−
** [http://www.uniprot.org/uniprot/Q9RXY6 Q9RXY6]
 
−
** [http://www.uniprot.org/uniprot/Q9PHT1 Q9PHT1]
 
−
** [http://www.uniprot.org/uniprot/Q52352 Q52352]
 
−
** [http://www.uniprot.org/uniprot/Q49184 Q49184]
 
−
** [http://www.uniprot.org/uniprot/Q51161 Q51161]
 
−
** [http://www.uniprot.org/uniprot/P73248 P73248]
 
−
** [http://www.uniprot.org/uniprot/P0C002 P0C002]
 
−
** [http://www.uniprot.org/uniprot/O04862 O04862]
 
−
** [http://www.uniprot.org/uniprot/Q9SZV3 Q9SZV3]
 
−
** [http://www.uniprot.org/uniprot/Q9X8H8 Q9X8H8]
 
−
** [http://www.uniprot.org/uniprot/O75013 O75013]
 
−
** [http://www.uniprot.org/uniprot/P0C0X2 P0C0X2]
 
−
</div>
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=dihydropteroate synthase}}
+
{{#set: common-name=lysophospholipase}}
−
{{#set: ec-number=ec-2.5.1.15}}
+
{{#set: ec-number=ec-3.1.1.5}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=10}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome|output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Revision as of 09:30, 27 August 2019

Reaction LYSOPHOSPHOLIPASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • lysophospholipase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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