Difference between revisions of "ACHMSSELCYSLh"
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(Created page with "Category:reaction == Reaction RXN-13600 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/4.1.2 ec-4.1.2] == Reaction formula == * 1 CPD-1103...") |
(Created page with "Category:reaction == Reaction CHORISMATEMUT-RXN == * direction: ** reversible * common-name: ** chorismate mutase * ec-number: ** [http://enzyme.expasy.org/EC/5.4.99.5 ec-...") |
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Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction RXN | + | == Reaction CHORISMATEMUT-RXN == |
* direction: | * direction: | ||
− | ** | + | ** reversible |
+ | * common-name: | ||
+ | ** chorismate mutase | ||
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/4. | + | ** [http://enzyme.expasy.org/EC/5.4.99.5 ec-5.4.99.5] |
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[CHORISMATE]][c] '''<=>''' 1 [[PREPHENATE]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | * Gene: [[SJ00045]] |
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
− | * Gene: [[ | + | * Gene: [[SJ07700]] |
− | ** Category: [[ | + | ** Category: [[annotation]] |
− | *** Source: [[ | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a |
− | |||
− | |||
− | |||
− | |||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
+ | *** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
− | * [[PWY- | + | * [[PWY-3461]], L-tyrosine biosynthesis II: |
− | ** '''1''' reactions found over ''' | + | ** '''3''' reactions found over '''3''' reactions in the full pathway |
+ | * [[PWY-6120]], L-tyrosine biosynthesis III: | ||
+ | ** '''2''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PHESYN]], L-phenylalanine biosynthesis I: | ||
+ | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-7626]], bacilysin biosynthesis: | ||
+ | ** '''1''' reactions found over '''10''' reactions in the full pathway | ||
+ | * [[PWY-3462]], L-phenylalanine biosynthesis II: | ||
+ | ** '''2''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[TYRSYN]], L-tyrosine biosynthesis I: | ||
+ | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-6627]], salinosporamide A biosynthesis: | ||
+ | ** '''3''' reactions found over '''15''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
+ | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
− | {{#set: direction= | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
− | {{#set: ec-number=ec-4. | + | * RHEA: |
− | {{#set: nb gene associated= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13900 13900] |
− | {{#set: nb pathway associated= | + | * LIGAND-RXN: |
− | {{#set: reconstruction category=orthology}} | + | ** [http://www.genome.jp/dbget-bin/www_bget?R01715 R01715] |
− | {{#set: reconstruction tool=pantograph}} | + | * UNIPROT: |
+ | ** [http://www.uniprot.org/uniprot/P19080 P19080] | ||
+ | ** [http://www.uniprot.org/uniprot/P27603 P27603] | ||
+ | ** [http://www.uniprot.org/uniprot/P32178 P32178] | ||
+ | ** [http://www.uniprot.org/uniprot/P43900 P43900] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9RQV7 Q9RQV7] | ||
+ | ** [http://www.uniprot.org/uniprot/P21204 P21204] | ||
+ | ** [http://www.uniprot.org/uniprot/Q58029 Q58029] | ||
+ | ** [http://www.uniprot.org/uniprot/Q57696 Q57696] | ||
+ | ** [http://www.uniprot.org/uniprot/P43902 P43902] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PII3 Q9PII3] | ||
+ | ** [http://www.uniprot.org/uniprot/P0A9J8 P0A9J8] | ||
+ | ** [http://www.uniprot.org/uniprot/P07023 P07023] | ||
+ | ** [http://www.uniprot.org/uniprot/Q02286 Q02286] | ||
+ | ** [http://www.uniprot.org/uniprot/Q02287 Q02287] | ||
+ | ** [http://www.uniprot.org/uniprot/P42738 P42738] | ||
+ | ** [http://www.uniprot.org/uniprot/O22409 O22409] | ||
+ | ** [http://www.uniprot.org/uniprot/O22410 O22410] | ||
+ | </div> | ||
+ | {{#set: direction=reversible}} | ||
+ | {{#set: common-name=chorismate mutase}} | ||
+ | {{#set: ec-number=ec-5.4.99.5}} | ||
+ | {{#set: nb gene associated=2}} | ||
+ | {{#set: nb pathway associated=7}} | ||
+ | {{#set: reconstruction category=annotation|orthology}} | ||
+ | {{#set: reconstruction tool=pathwaytools|pantograph}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}} | + | {{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 13:14, 14 January 2021
Contents
Reaction CHORISMATEMUT-RXN
- direction:
- reversible
- common-name:
- chorismate mutase
- ec-number:
Reaction formula
- 1 CHORISMATE[c] <=> 1 PREPHENATE[c]
Gene(s) associated with this reaction
- Gene: SJ00045
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ07700
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_nannochloropsis_salina, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_arabidopsis_thaliana, Tool: pantograph, Assignment: n.a, Comment: n.a
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-3461, L-tyrosine biosynthesis II:
- 3 reactions found over 3 reactions in the full pathway
- PWY-6120, L-tyrosine biosynthesis III:
- 2 reactions found over 3 reactions in the full pathway
- PHESYN, L-phenylalanine biosynthesis I:
- 3 reactions found over 3 reactions in the full pathway
- PWY-7626, bacilysin biosynthesis:
- 1 reactions found over 10 reactions in the full pathway
- PWY-3462, L-phenylalanine biosynthesis II:
- 2 reactions found over 3 reactions in the full pathway
- TYRSYN, L-tyrosine biosynthesis I:
- 3 reactions found over 3 reactions in the full pathway
- PWY-6627, salinosporamide A biosynthesis:
- 3 reactions found over 15 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- category: orthology; source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
External links