Difference between revisions of "ACID-PHOSPHATASE-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=KETOACYLCOATHIOL-RXN KETOACYLCOATHIOL-RXN] == * direction: ** left-to-right * common-name: ** acety...")
(Created page with "Category:reaction == Reaction ACID-PHOSPHATASE-RXN == * direction: ** left-to-right * common-name: ** acid phosphatase ** acid phosphatase / phosphotransferase * ec-number...")
 
(7 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=KETOACYLCOATHIOL-RXN KETOACYLCOATHIOL-RXN] ==
+
== Reaction ACID-PHOSPHATASE-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** acetyl-coa c-acyltransferase
+
** acid phosphatase
−
** 3-ketoacyl-coa thiolase
+
** acid phosphatase / phosphotransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.3.1.16 ec-2.3.1.16]
+
** [http://enzyme.expasy.org/EC/3.1.3.2 ec-3.1.3.2]
−
* synonymous:
 
−
** beta-ketothiolase
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[3-KETOACYL-COA]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[Saturated-Fatty-Acyl-CoA]][c]
+
* 1 [[Orthophosphoric-Monoesters]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Alcohols]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ21818]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ22353]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ16470]]
+
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ20260]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ02191]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ20261]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ09354]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ06607]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ05429]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ12563]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ05430]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ21817]]
+
* Gene: [[SJ01171]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ04752]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ14898]]
+
* Gene: [[SJ17787]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ01423]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ17788]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ09371]]
+
* Gene: [[SJ04753]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ07345]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7288]], fatty acid &beta;-oxidation (peroxisome, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7288 PWY-7288]
+
* [[PWY-6348]], phosphate acquisition:
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[PWY-5136]], fatty acid &beta;-oxidation II (peroxisome): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5136 PWY-5136]
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
* [[FAO-PWY]], fatty acid &beta;-oxidation I: [http://metacyc.org/META/NEW-IMAGE?object=FAO-PWY FAO-PWY]
 
−
** '''6''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY66-391]], fatty acid &beta;-oxidation VI (peroxisome): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-391 PWY66-391]
 
−
** '''6''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21566 21566]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15018 15018]
−
* PIR:
+
* LIGAND-RXN:
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XURTAB XURTAB]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00626 R00626]
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XURTAA XURTAA]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XURT XURT]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XUHUAB XUHUAB]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XUEC XUEC]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T52165 T52165]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T52110 T52110]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T07989 T07989]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S72532 S72532]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S57792 S57792]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S36838 S36838]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S33637 S33637]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S22784 S22784]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JS0624 JS0624]
 
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=H64890 H64890]
 
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P77525 P77525]
+
** [http://www.uniprot.org/uniprot/P08091 P08091]
−
** [http://www.uniprot.org/uniprot/P28790 P28790]
+
** [http://www.uniprot.org/uniprot/P14924 P14924]
−
** [http://www.uniprot.org/uniprot/P27796 P27796]
+
** [http://www.uniprot.org/uniprot/P20611 P20611]
−
** [http://www.uniprot.org/uniprot/Q08375 Q08375]
+
** [http://www.uniprot.org/uniprot/P26976 P26976]
−
** [http://www.uniprot.org/uniprot/Q05493 Q05493]
+
** [http://www.uniprot.org/uniprot/P29288 P29288]
−
** [http://www.uniprot.org/uniprot/Q42918 Q42918]
+
** [http://www.uniprot.org/uniprot/P09889 P09889]
−
** [http://www.uniprot.org/uniprot/Q43742 Q43742]
+
** [http://www.uniprot.org/uniprot/Q7M4X4 Q7M4X4]
−
** [http://www.uniprot.org/uniprot/Q56WD9 Q56WD9]
+
** [http://www.uniprot.org/uniprot/P07102 P07102]
−
** [http://www.uniprot.org/uniprot/Q570C8 Q570C8]
+
** [http://www.uniprot.org/uniprot/Q12546 Q12546]
−
** [http://www.uniprot.org/uniprot/P21151 P21151]
+
** [http://www.uniprot.org/uniprot/Q01652 Q01652]
−
** [http://www.uniprot.org/uniprot/P09110 P09110]
+
** [http://www.uniprot.org/uniprot/P52291 P52291]
−
** [http://www.uniprot.org/uniprot/P13437 P13437]
+
** [http://www.uniprot.org/uniprot/Q7M4U8 Q7M4U8]
−
** [http://www.uniprot.org/uniprot/P21775 P21775]
+
** [http://www.uniprot.org/uniprot/P20646 P20646]
−
** [http://www.uniprot.org/uniprot/P07871 P07871]
+
** [http://www.uniprot.org/uniprot/P15309 P15309]
−
* LIGAND-RXN:
+
** [http://www.uniprot.org/uniprot/P37274 P37274]
−
** [http://www.genome.jp/dbget-bin/www_bget?R00391 R00391]
+
** [http://www.uniprot.org/uniprot/Q05117 Q05117]
 +
** [http://www.uniprot.org/uniprot/P34755 P34755]
 +
** [http://www.uniprot.org/uniprot/P20584 P20584]
 +
** [http://www.uniprot.org/uniprot/P00635 P00635]
 +
** [http://www.uniprot.org/uniprot/P24031 P24031]
 +
** [http://www.uniprot.org/uniprot/P26975 P26975]
 +
** [http://www.uniprot.org/uniprot/P11117 P11117]
 +
** [http://www.uniprot.org/uniprot/Q01682 Q01682]
 +
** [http://www.uniprot.org/uniprot/P24638 P24638]
 +
** [http://www.uniprot.org/uniprot/Q7M1H4 Q7M1H4]
 +
** [http://www.uniprot.org/uniprot/P13686 P13686]
 +
** [http://www.uniprot.org/uniprot/P28581 P28581]
 +
** [http://www.uniprot.org/uniprot/P30887 P30887]
 +
** [http://www.uniprot.org/uniprot/P38693 P38693]
 +
** [http://www.uniprot.org/uniprot/O24319 O24319]
 +
** [http://www.uniprot.org/uniprot/P35842 P35842]
 +
** [http://www.uniprot.org/uniprot/Q9VAD0 Q9VAD0]
 +
** [http://www.uniprot.org/uniprot/Q9SW12 Q9SW12]
 +
** [http://www.uniprot.org/uniprot/P27061 P27061]
 +
** [http://www.uniprot.org/uniprot/P44009 P44009]
 +
** [http://www.uniprot.org/uniprot/Q9ZS50 Q9ZS50]
 +
** [http://www.uniprot.org/uniprot/Q9SDZ9 Q9SDZ9]
 +
** [http://www.uniprot.org/uniprot/Q9XF09 Q9XF09]
 
</div>
 
</div>
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=acetyl-coa c-acyltransferase|3-ketoacyl-coa thiolase}}
+
{{#set: common-name=acid phosphatase|acid phosphatase / phosphotransferase}}
−
{{#set: ec-number=ec-2.3.1.16}}
+
{{#set: ec-number=ec-3.1.3.2}}
−
{{#set: synonymous=beta-ketothiolase}}
+
{{#set: nb gene associated=16}}
−
{{#set: nb gene associated=5}}
+
{{#set: nb pathway associated=1}}
−
{{#set: nb pathway associated=4}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
−
{{#set: reconstruction tool=pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:21, 18 March 2021

Reaction ACID-PHOSPHATASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • acid phosphatase
    • acid phosphatase / phosphotransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6348, phosphate acquisition:
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=ACID-PHOSPHATASE-RXN&oldid=141645"