Difference between revisions of "ACOA40OR"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PGIBh PGIBh] == * direction: ** reversible * common-name: ** glucose-6-phosphate isomerase, chlorop...")
(Created page with "Category:reaction == Reaction RXN-9680 == * direction: ** left-to-right * common-name: ** dimethylglycine-betaine methyltransferase * ec-number: ** [http://enzyme.expasy.o...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PGIBh PGIBh] ==
+
== Reaction RXN-9680 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** glucose-6-phosphate isomerase, chloroplast (g6p-b)
+
** dimethylglycine-betaine methyltransferase
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/2.1.1.161 ec-2.1.1.161]
 +
* synonymous:
 +
** sarcosine-dimethylglycine methyltransferase
 +
** apdmt
 +
** sarcosine dimethylglycine n-methyltransferase
 +
** s-adenosyl-l-methionine:n,n-dimethylglycine n-methyltransferase
 +
** sdmt
 +
** glycine sarcosine dimethylglycine n-methyltransferase
 +
** gsdmt
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1.0 [[GLC-6-P]][h] '''<=>''' 1.0 [[FRUCTOSE-6P]][h]
+
* 1 [[DIMETHYL-GLYCINE]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[BETAINE]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ00085]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** Category: [[orthology]]
+
* Gene: [[SJ12118]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
** Category: [[annotation]]
−
* Gene: [[SJ08179]]
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[SJ10116]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ12128]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ12119]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ11087]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ14716]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ18177]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ12116]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ03081]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ02539]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ02540]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[P541-PWY]], glycine betaine biosynthesis IV (from glycine):
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6004]], glycine betaine biosynthesis V (from glycine):
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
{{#set: direction=reversible}}
+
* RHEA:
−
{{#set: common-name=glucose-6-phosphate isomerase, chloroplast (g6p-b)}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10073 10073]
−
{{#set: nb gene associated=2}}
+
* LIGAND-RXN:
−
{{#set: nb pathway associated=0}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R07244 R07244]
−
{{#set: reconstruction category=orthology}}
+
{{#set: direction=left-to-right}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: common-name=dimethylglycine-betaine methyltransferase}}
 +
{{#set: ec-number=ec-2.1.1.161}}
 +
{{#set: synonymous=sarcosine-dimethylglycine methyltransferase|s-adenosyl-l-methionine:n,n-dimethylglycine n-methyltransferase|sarcosine dimethylglycine n-methyltransferase|gsdmt|apdmt|glycine sarcosine dimethylglycine n-methyltransferase|sdmt}}
 +
{{#set: nb gene associated=11}}
 +
{{#set: nb pathway associated=2}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 20:39, 18 December 2020

Reaction RXN-9680

  • direction:
    • left-to-right
  • common-name:
    • dimethylglycine-betaine methyltransferase
  • ec-number:
  • synonymous:
    • sarcosine-dimethylglycine methyltransferase
    • apdmt
    • sarcosine dimethylglycine n-methyltransferase
    • s-adenosyl-l-methionine:n,n-dimethylglycine n-methyltransferase
    • sdmt
    • glycine sarcosine dimethylglycine n-methyltransferase
    • gsdmt

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • P541-PWY, glycine betaine biosynthesis IV (from glycine):
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-6004, glycine betaine biosynthesis V (from glycine):
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links






Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=ACOA40OR&oldid=49185"