Difference between revisions of "ACOA80OR"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction BIOTIN-CARBOXYL-RXN == * direction: ** left-to-right * common-name: ** biotin carboxylase * ec-number: ** [http://enzyme.expasy.org/EC/6.3.4....")
(Created page with "Category:reaction == Reaction RXN66-306 == * direction: ** left-to-right * common-name: ** 14-demethyllanosterol δ14 reductase ** 4,4-dimethyl-5α-cholesta-8,24...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction BIOTIN-CARBOXYL-RXN ==
+
== Reaction RXN66-306 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** biotin carboxylase
+
** 14-demethyllanosterol δ14 reductase
 +
** 4,4-dimethyl-5α-cholesta-8,24-dien-3β-ol:nadp+ δ14-oxidoreductase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/6.3.4.14 ec-6.3.4.14]
+
** [http://enzyme.expasy.org/EC/1.3.1.70 ec-1.3.1.70]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[HCO3]][c] '''+''' 1 [[biotin-L-lysine-in-BCCP-dimers]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[carboxybiotin-L-lysine-in-BCCP-dimers]][c]
+
* 1 [[44-DIMETHYL-CHOLESTA-814-24-TRIENOL]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[44-DIMETHYL-824-CHOLESTADIENOL]][c] '''+''' 1 [[NADP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ12265]]
−
* Gene: [[SJ14528]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ12870]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ02214]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ12670]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ17987]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ00485]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ14529]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ06726]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5744]], glyoxylate assimilation:
+
* [[PWY66-4]], cholesterol biosynthesis III (via desmosterol):
−
** '''4''' reactions found over '''13''' reactions in the full pathway
+
** '''14''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-5743]], 3-hydroxypropanoate cycle:
+
* [[PWY-6074]], zymosterol biosynthesis:
−
** '''5''' reactions found over '''13''' reactions in the full pathway
+
** '''6''' reactions found over '''14''' reactions in the full pathway
−
* [[PWY-5789]], 3-hydroxypropanoate/4-hydroxybutanate cycle:
+
* [[PWY66-341]], cholesterol biosynthesis I:
−
** '''8''' reactions found over '''18''' reactions in the full pathway
+
** '''14''' reactions found over '''18''' reactions in the full pathway
−
* [[PWY0-1264]], biotin-carboxyl carrier protein assembly:
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13502 13502]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R04385 R04385]
+
** [http://www.genome.jp/dbget-bin/www_bget?R05639 R05639]
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q06862 Q06862]
 
−
** [http://www.uniprot.org/uniprot/O67483 O67483]
 
−
** [http://www.uniprot.org/uniprot/Q9CHF3 Q9CHF3]
 
−
** [http://www.uniprot.org/uniprot/Q58626 Q58626]
 
−
** [http://www.uniprot.org/uniprot/P43873 P43873]
 
−
** [http://www.uniprot.org/uniprot/Q9PN09 Q9PN09]
 
−
** [http://www.uniprot.org/uniprot/Q9JW07 Q9JW07]
 
−
** [http://www.uniprot.org/uniprot/P24182 P24182]
 
−
** [http://www.uniprot.org/uniprot/O04983 O04983]
 
−
** [http://www.uniprot.org/uniprot/O81273 O81273]
 
−
** [http://www.uniprot.org/uniprot/Q42777 Q42777]
 
−
** [http://www.uniprot.org/uniprot/Q39825 Q39825]
 
−
** [http://www.uniprot.org/uniprot/O23960 O23960]
 
−
** [http://www.uniprot.org/uniprot/O52602 O52602]
 
−
** [http://www.uniprot.org/uniprot/Q9R9I4 Q9R9I4]
 
−
</div>
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=biotin carboxylase}}
+
{{#set: common-name=14-demethyllanosterol &delta;14 reductase|4,4-dimethyl-5&alpha;-cholesta-8,24-dien-3&beta;-ol:nadp+ &delta;14-oxidoreductase}}
−
{{#set: ec-number=ec-6.3.4.14}}
+
{{#set: ec-number=ec-1.3.1.70}}
−
{{#set: nb gene associated=8}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=3}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 15:07, 5 January 2021

Reaction RXN66-306

  • direction:
    • left-to-right
  • common-name:
    • 14-demethyllanosterol δ14 reductase
    • 4,4-dimethyl-5α-cholesta-8,24-dien-3β-ol:nadp+ δ14-oxidoreductase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY66-4, cholesterol biosynthesis III (via desmosterol):
    • 14 reactions found over 4 reactions in the full pathway
  • PWY-6074, zymosterol biosynthesis:
    • 6 reactions found over 14 reactions in the full pathway
  • PWY66-341, cholesterol biosynthesis I:
    • 14 reactions found over 18 reactions in the full pathway

Reconstruction information

External links





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=ACOA80OR&oldid=64559"