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| − | [[Category:reaction]] | + | [[Category:metabolite]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARGINASE-RXN ARGINASE-RXN] == | + | == Metabolite ACTINOMYCIN-D == |
| − | * direction:
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| − | ** reversible
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| | * common-name: | | * common-name: |
| − | ** arginase | + | ** actinomycin d |
| − | * ec-number: | + | * smiles: |
| − | ** [http://enzyme.expasy.org/EC/3.5.3.1 ec-3.5.3.1] | + | ** cc(c)c1(c(=o)n7([ch](c(n(c)cc(n(c(c(c)c)c(=o)oc(c)c(c(n1)=o)nc(=o)c6(c=cc(c)=c2(c(n=c5(c(o2)=c(c)c(=o)c(n)=c(c(=o)nc4(c(oc(c(c(c)c)n(c)c(=o)cn(c)c(=o)[ch]3(cccn3c(c(c(c)c)nc(=o)4)=o))=o)c))5))=6)))c)=o)=o)ccc7)) |
| − | == Reaction formula == | + | * inchi-key: |
| − | * 1 [[ARG]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[L-ORNITHINE]][c] '''+''' 1 [[UREA]][c]
| + | ** rjurfgzvjuqbhk-iixsonldsa-n |
| − | == Gene(s) associated with this reaction == | + | * molecular-weight: |
| − | * Gene: [[SJ12906]]
| + | ** 1255.432 |
| − | ** Category: [[annotation]]
| + | == Reaction(s) known to consume the compound == |
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| + | == Reaction(s) known to produce the compound == |
| − | ** Category: [[orthology]]
| + | * [[RXN-17067]] |
| − | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| + | == Reaction(s) of unknown directionality == |
| − | * Gene: [[SJ00773]]
| + | {{#set: common-name=actinomycin d}} |
| − | ** Category: [[orthology]]
| + | {{#set: inchi-key=inchikey=rjurfgzvjuqbhk-iixsonldsa-n}} |
| − | *** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
| + | {{#set: molecular-weight=1255.432}} |
| − | == Pathway(s) ==
| |
| − | * [[PWY-6922]], L-Nδ-acetylornithine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6922 PWY-6922]
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| − | ** '''5''' reactions found over '''7''' reactions in the full pathway
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| − | * [[PWY-4984]], urea cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4984 PWY-4984]
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| − | ** '''5''' reactions found over '''5''' reactions in the full pathway
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| − | * [[ARG-GLU-PWY]], L-arginine degradation VII (arginase 3 pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARG-GLU-PWY ARG-GLU-PWY]
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| − | ** '''2''' reactions found over '''2''' reactions in the full pathway | |
| − | * [[PWY-6305]], putrescine biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6305 PWY-6305]
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| − | ** '''4''' reactions found over '''4''' reactions in the full pathway | |
| − | * [[ARG-PRO-PWY]], L-arginine degradation VI (arginase 2 pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARG-PRO-PWY ARG-PRO-PWY]
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| − | ** '''3''' reactions found over '''4''' reactions in the full pathway | |
| − | * [[ARGASEDEG-PWY]], L-arginine degradation I (arginase pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARGASEDEG-PWY ARGASEDEG-PWY]
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| − | ** '''3''' reactions found over '''3''' reactions in the full pathway | |
| − | * [[CITRULBIO-PWY]], L-citrulline biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=CITRULBIO-PWY CITRULBIO-PWY]
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| − | ** '''7''' reactions found over '''8''' reactions in the full pathway
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| − | == Reconstruction information == | |
| − | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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| − | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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| − | * category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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| − | == External links == | |
| − | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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| − | * RHEA: | |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20572 20572]
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| − | * LIGAND-RXN:
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| − | ** [http://www.genome.jp/dbget-bin/www_bget?R00551 R00551]
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| − | * UNIPROT:
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| − | ** [http://www.uniprot.org/uniprot/P05089 P05089]
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| − | ** [http://www.uniprot.org/uniprot/P07824 P07824]
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| − | ** [http://www.uniprot.org/uniprot/P40906 P40906]
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| − | ** [http://www.uniprot.org/uniprot/Q7M0Z3 Q7M0Z3]
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| − | ** [http://www.uniprot.org/uniprot/P14012 P14012]
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| − | ** [http://www.uniprot.org/uniprot/P37818 P37818]
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| − | ** [http://www.uniprot.org/uniprot/P49900 P49900]
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| − | ** [http://www.uniprot.org/uniprot/P39138 P39138]
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| − | ** [http://www.uniprot.org/uniprot/P53608 P53608]
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| − | ** [http://www.uniprot.org/uniprot/P72703 P72703]
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| − | ** [http://www.uniprot.org/uniprot/O68051 O68051]
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| − | ** [http://www.uniprot.org/uniprot/O49046 O49046]
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| − | ** [http://www.uniprot.org/uniprot/O76895 O76895]
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| − | ** [http://www.uniprot.org/uniprot/P33280 P33280]
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| − | ** [http://www.uniprot.org/uniprot/Q10066 Q10066]
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| − | ** [http://www.uniprot.org/uniprot/P00812 P00812]
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| − | </div>
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| − | {{#set: direction=reversible}}
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| − | {{#set: common-name=arginase}} | |
| − | {{#set: ec-number=ec-3.5.3.1}} | |
| − | {{#set: nb gene associated=2}} | |
| − | {{#set: nb pathway associated=7}}
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| − | {{#set: reconstruction category=annotation|orthology}}
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| − | {{#set: reconstruction tool=pantograph|pathwaytools}}
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| − | {{#set: reconstruction comment=n.a}}
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| − | {{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome|output_pantograph_arabidopsis_thaliana}}
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