Difference between revisions of "ACYLAMINOACYL-PEPTIDASE-RXN"

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(Created page with "Category:reaction == Reaction 3.4.21.89-RXN == * direction: ** left-to-right * common-name: ** leader peptidase * ec-number: ** [http://enzyme.expasy.org/EC/3.4.21.89 ec-3...")
(Created page with "Category:reaction == Reaction SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN == * direction: ** left-to-right * common-name: ** succinate semialdehyde dehydrogenase, nad+-depend...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction 3.4.21.89-RXN ==
+
== Reaction SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** leader peptidase
+
** succinate semialdehyde dehydrogenase, nad+-dependent
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/3.4.21.89 ec-3.4.21.89]
+
** [http://enzyme.expasy.org/EC/1.2.1.24 ec-1.2.1.24]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[Peptides-with-Leader-Sequence]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Leader-Sequences]][c] '''+''' 1 [[Peptides-holder]][c]
+
* 1 [[NAD]][c] '''+''' 1 [[SUCC-S-ALD]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[NADH]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[SUC]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ15986]]
+
* Gene: [[SJ05897]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
* Gene: [[SJ21699]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ19533]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ01779]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[GLUDEG-I-PWY]], GABA shunt:
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6473]], 4-aminobutanoate degradation IV:
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-6535]], 4-aminobutanoate degradation I:
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-4321]], L-glutamate degradation IV:
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* METANETX-RXN : MNXR104540
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13218 13218]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00713 R00713]
 
* UNIPROT:
 
* UNIPROT:
** [http://www.uniprot.org/uniprot/Q9RUF9 Q9RUF9]
+
** [http://www.uniprot.org/uniprot/P51649 P51649]
** [http://www.uniprot.org/uniprot/Q9ZE32 Q9ZE32]
+
** [http://www.uniprot.org/uniprot/P51650 P51650]
** [http://www.uniprot.org/uniprot/Q9CDG2 Q9CDG2]
 
** [http://www.uniprot.org/uniprot/Q9KPB1 Q9KPB1]
 
** [http://www.uniprot.org/uniprot/Q9PBA0 Q9PBA0]
 
** [http://www.uniprot.org/uniprot/Q57708 Q57708]
 
** [http://www.uniprot.org/uniprot/O67088 O67088]
 
** [http://www.uniprot.org/uniprot/Q9JV66 Q9JV66]
 
** [http://www.uniprot.org/uniprot/Q9PP67 Q9PP67]
 
** [http://www.uniprot.org/uniprot/Q9I5G7 Q9I5G7]
 
** [http://www.uniprot.org/uniprot/Q8FF16 Q8FF16]
 
** [http://www.uniprot.org/uniprot/Q8XA33 Q8XA33]
 
** [http://www.uniprot.org/uniprot/P41026 P41026]
 
** [http://www.uniprot.org/uniprot/P41027 P41027]
 
** [http://www.uniprot.org/uniprot/P37943 P37943]
 
** [http://www.uniprot.org/uniprot/Q57350 Q57350]
 
** [http://www.uniprot.org/uniprot/Q7M0V9 Q7M0V9]
 
** [http://www.uniprot.org/uniprot/P0A1W2 P0A1W2]
 
** [http://www.uniprot.org/uniprot/P26844 P26844]
 
** [http://www.uniprot.org/uniprot/P28628 P28628]
 
** [http://www.uniprot.org/uniprot/P41025 P41025]
 
** [http://www.uniprot.org/uniprot/Q51876 Q51876]
 
** [http://www.uniprot.org/uniprot/Q52697 Q52697]
 
** [http://www.uniprot.org/uniprot/Q45225 Q45225]
 
** [http://www.uniprot.org/uniprot/P72660 P72660]
 
** [http://www.uniprot.org/uniprot/P73157 P73157]
 
** [http://www.uniprot.org/uniprot/O69884 O69884]
 
** [http://www.uniprot.org/uniprot/P00803 P00803]
 
</div>
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=leader peptidase}}
+
{{#set: common-name=succinate semialdehyde dehydrogenase, nad+-dependent}}
{{#set: ec-number=ec-3.4.21.89}}
+
{{#set: ec-number=ec-1.2.1.24}}
{{#set: nb gene associated=4}}
+
{{#set: nb gene associated=1}}
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=4}}
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}

Revision as of 08:37, 15 March 2021

Reaction SUCCINATE-SEMIALDEHYDE-DEHYDROGENASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • succinate semialdehyde dehydrogenase, nad+-dependent
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • GLUDEG-I-PWY, GABA shunt:
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-6473, 4-aminobutanoate degradation IV:
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-6535, 4-aminobutanoate degradation I:
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-4321, L-glutamate degradation IV:
    • 3 reactions found over 5 reactions in the full pathway

Reconstruction information

External links