Difference between revisions of "ACYLCOADEHYDROG-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRANS-RXN-21 TRANS-RXN-21] == * direction: ** left-to-right == Reaction formula == * 1 D-galactop...")
(Created page with "Category:reaction == Reaction ACYLCOADEHYDROG-RXN == * direction: ** left-to-right * common-name: ** acyl-coa dehydrogenase * ec-number: ** [http://enzyme.expasy.org/EC/1....")
 
(7 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRANS-RXN-21 TRANS-RXN-21] ==
+
== Reaction ACYLCOADEHYDROG-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** acyl-coa dehydrogenase
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/1.3.8 ec-1.3.8]
 +
* synonymous:
 +
** general acyl coa dehydrogenase
 +
** medium-chain acyl-coenzyme a dehydrogenase
 +
** fatty acyl coenzyme a dehydrogenase
 +
** long-chain acyl coenzyme a dehydrogenase
 +
** fatty-acyl-coa dehydrogenase
 +
** long-chain acyl-coa dehydrogenase
 +
** acyl coenzyme a dehydrogenase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[D-galactopyranose]][e] '''+''' 1 [[PROTON]][e] '''=>''' 1 [[D-galactopyranose]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[ETF-Oxidized]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Saturated-Fatty-Acyl-CoA]][c] '''=>''' 1 [[ETF-Reduced]][c] '''+''' 1 [[TRANS-D2-ENOYL-COA]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ20736]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ03090]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ19669]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ04334]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ06456]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ01215]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ06470]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ21233]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ07451]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ15262]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ13468]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ07241]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ07909]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ21703]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ07452]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[FAO-PWY]], fatty acid &beta;-oxidation I (generic):
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR115669
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=44705 44705]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P16219 P16219]
 +
** [http://www.uniprot.org/uniprot/P45952 P45952]
 +
** [http://www.uniprot.org/uniprot/P15651 P15651]
 +
** [http://www.uniprot.org/uniprot/P11310 P11310]
 +
** [http://www.uniprot.org/uniprot/P08503 P08503]
 +
** [http://www.uniprot.org/uniprot/Q07417 Q07417]
 +
** [http://www.uniprot.org/uniprot/Q54857 Q54857]
 +
** [http://www.uniprot.org/uniprot/P45867 P45867]
 +
** [http://www.uniprot.org/uniprot/Q9X3R3 Q9X3R3]
 +
** [http://www.uniprot.org/uniprot/Q9R9I6 Q9R9I6]
 +
** [http://www.uniprot.org/uniprot/Q96329 Q96329]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=1}}
+
{{#set: common-name=acyl-coa dehydrogenase}}
−
{{#set: nb pathway associated=0}}
+
{{#set: ec-number=ec-1.3.8}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: synonymous=medium-chain acyl-coenzyme a dehydrogenase|long-chain acyl coenzyme a dehydrogenase|long-chain acyl-coa dehydrogenase|fatty-acyl-coa dehydrogenase|fatty acyl coenzyme a dehydrogenase|general acyl coa dehydrogenase|acyl coenzyme a dehydrogenase}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: nb gene associated=14}}
 +
{{#set: nb pathway associated=1}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:20, 18 March 2021

Reaction ACYLCOADEHYDROG-RXN

  • direction:
    • left-to-right
  • common-name:
    • acyl-coa dehydrogenase
  • ec-number:
  • synonymous:
    • general acyl coa dehydrogenase
    • medium-chain acyl-coenzyme a dehydrogenase
    • fatty acyl coenzyme a dehydrogenase
    • long-chain acyl coenzyme a dehydrogenase
    • fatty-acyl-coa dehydrogenase
    • long-chain acyl-coa dehydrogenase
    • acyl coenzyme a dehydrogenase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • FAO-PWY, fatty acid β-oxidation I (generic):
    • 6 reactions found over 7 reactions in the full pathway

Reconstruction information

External links






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