Difference between revisions of "ADENODEAMIN-RXN"

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(Created page with "Category:reaction == Reaction DCMP-DEAMINASE-RXN == * direction: ** left-to-right * common-name: ** dcmp deaminase * ec-number: ** [http://enzyme.expasy.org/EC/3.5.4.12 ec...")
(Created page with "Category:reaction == Reaction ADENODEAMIN-RXN == * direction: ** left-to-right * common-name: ** adenosine deaminase * ec-number: ** [http://enzyme.expasy.org/EC/3.5.4.4 e...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction DCMP-DEAMINASE-RXN ==
+
== Reaction ADENODEAMIN-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** dcmp deaminase
+
** adenosine deaminase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.5.4.12 ec-3.5.4.12]
+
** [http://enzyme.expasy.org/EC/3.5.4.4 ec-3.5.4.4]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[DCMP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[DUMP]][c]
+
* 1 [[ADENOSINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[INOSINE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ22508]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ12082]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ17056]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ04837]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ11072]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
* Gene: [[SJ20035]]
 
* Gene: [[SJ20035]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ10996]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
Line 16: Line 37:
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7210]], pyrimidine deoxyribonucleotides biosynthesis from CTP:
+
* [[PWY-6611]], adenine and adenosine salvage V:
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[SALVADEHYPOX-PWY]], adenosine nucleotides degradation II:
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6609]], adenine and adenosine salvage III:
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY0-1296]], purine ribonucleosides degradation:
 +
** '''6''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* METANETX-RXN : MNXR97185
+
* METANETX-RXN : MNXR95432
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22925 22925]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24408 24408]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01663 R01663]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01560 R01560]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P32321 P32321]
+
** [http://www.uniprot.org/uniprot/P22333 P22333]
−
** [http://www.uniprot.org/uniprot/P00814 P00814]
+
** [http://www.uniprot.org/uniprot/P00813 P00813]
−
** [http://www.uniprot.org/uniprot/P16006 P16006]
+
** [http://www.uniprot.org/uniprot/P03958 P03958]
−
** [http://www.uniprot.org/uniprot/P06773 P06773]
+
** [http://www.uniprot.org/uniprot/Q9CIR9 Q9CIR9]
−
** [http://www.uniprot.org/uniprot/O74069 O74069]
+
** [http://www.uniprot.org/uniprot/P55266 P55266]
 +
** [http://www.uniprot.org/uniprot/P53984 P53984]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=dcmp deaminase}}
+
{{#set: common-name=adenosine deaminase}}
−
{{#set: ec-number=ec-3.5.4.12}}
+
{{#set: ec-number=ec-3.5.4.4}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=7}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=4}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}}

Latest revision as of 11:23, 18 March 2021

Reaction ADENODEAMIN-RXN

  • direction:
    • left-to-right
  • common-name:
    • adenosine deaminase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6611, adenine and adenosine salvage V:
    • 2 reactions found over 3 reactions in the full pathway
  • SALVADEHYPOX-PWY, adenosine nucleotides degradation II:
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6609, adenine and adenosine salvage III:
    • 4 reactions found over 4 reactions in the full pathway
  • PWY0-1296, purine ribonucleosides degradation:
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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