Difference between revisions of "ADENOSYLHOMOCYSTEINE-NUCLEOSIDASE-RXN"

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(Created page with "Category:reaction == Reaction PNKIN-RXN == * direction: ** left-to-right * common-name: ** pyridoxine kinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7.1.35 ec-2.7.1...")
(Created page with "Category:reaction == Reaction ADENOSYLHOMOCYSTEINE-NUCLEOSIDASE-RXN == * direction: ** left-to-right * common-name: ** adenosylhomocysteine nucleosidase * ec-number: ** [h...")
 
(3 intermediate revisions by 2 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction PNKIN-RXN ==
+
== Reaction ADENOSYLHOMOCYSTEINE-NUCLEOSIDASE-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** pyridoxine kinase
+
** adenosylhomocysteine nucleosidase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.1.35 ec-2.7.1.35]
+
** [http://enzyme.expasy.org/EC/3.2.2.9 ec-3.2.2.9]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[PYRIDOXINE]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[PYRIDOXINE-5P]][c]
+
* 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ADENINE]][c] '''+''' 1 [[CPD-564]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ08289]]
+
* Gene: [[SJ02916]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ14436]]
+
* Gene: [[SJ14933]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ07466]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PLPSAL-PWY]], pyridoxal 5'-phosphate salvage I:
+
* [[PWY-6153]], autoinducer AI-2 biosynthesis I:
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''1''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-7204]], pyridoxal 5'-phosphate salvage II (plants):
+
* [[PWY-6154]], autoinducer AI-2 biosynthesis II (Vibrio):
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
** '''1''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-7282]], 4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis:
+
* [[PWY-6151]], S-adenosyl-L-methionine salvage I:
−
** '''6''' reactions found over '''10''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-I9]], L-cysteine biosynthesis VI (from L-methionine):
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR95625
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25109 25109]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17806 17806]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01909 R01909]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00194 R00194]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q9JV64 Q9JV64]
 +
** [http://www.uniprot.org/uniprot/Q9PJ10 Q9PJ10]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=pyridoxine kinase}}
+
{{#set: common-name=adenosylhomocysteine nucleosidase}}
−
{{#set: ec-number=ec-2.7.1.35}}
+
{{#set: ec-number=ec-3.2.2.9}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=3}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=4}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:20, 18 March 2021

Reaction ADENOSYLHOMOCYSTEINE-NUCLEOSIDASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • adenosylhomocysteine nucleosidase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6153, autoinducer AI-2 biosynthesis I:
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-6154, autoinducer AI-2 biosynthesis II (Vibrio):
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-6151, S-adenosyl-L-methionine salvage I:
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-I9, L-cysteine biosynthesis VI (from L-methionine):
    • 4 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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