Difference between revisions of "ADENYLOSUCCINATE-SYNTHASE-RXN"

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(Created page with "Category:reaction == Reaction RXN-8391 == * direction: ** left-to-right * common-name: ** 3-oxo-petroselinoyl-[acp] synthase * ec-number: ** [http://enzyme.expasy.org/EC/2...")
(Created page with "Category:reaction == Reaction RXN-12178 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/3.2.1.179 ec-3.2.1.179] == Reaction formula == * 1 ...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-8391 ==
+
== Reaction RXN-12178 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** 3-oxo-petroselinoyl-[acp] synthase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.3.1.179 ec-2.3.1.179]
+
** [http://enzyme.expasy.org/EC/3.2.1.179 ec-3.2.1.179]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[Delta4-hexadecenoyl-ACPs]][c] '''+''' 1 [[MALONYL-ACP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[3-oxo-petroselinoyl-ACPs]][c] '''+''' 1 [[ACP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
* 1 [[CPD-36]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-13122]][c] '''+''' 1 [[N-acetyl-D-galactosamine]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ04443]]
+
* Gene: [[SJ13212]]
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** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ00005]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ15984]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5367]], petroselinate biosynthesis:
+
* [[PWY-6572]], chondroitin sulfate degradation I (bacterial):
−
** '''2''' reactions found over '''6''' reactions in the full pathway
+
** '''2''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-7646]], dermatan sulfate degradation I (bacterial):
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31654 31654]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=3-oxo-petroselinoyl-[acp] synthase}}
+
{{#set: ec-number=ec-3.2.1.179}}
−
{{#set: ec-number=ec-2.3.1.179}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb gene associated=3}}
+
{{#set: nb pathway associated=2}}
−
{{#set: nb pathway associated=1}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction tool=pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}

Revision as of 11:22, 15 January 2021

Reaction RXN-12178

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6572, chondroitin sulfate degradation I (bacterial):
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-7646, dermatan sulfate degradation I (bacterial):
    • 1 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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