Difference between revisions of "ADOMET-DMK-METHYLTRANSFER-RXN"

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(Created page with "Category:reaction == Reaction GLUTDEHYD-RXN == * direction: ** reversible * common-name: ** glutamate dehydrogenase * ec-number: ** [http://enzyme.expasy.org/EC/1.4.1.4 ec...")
(Created page with "Category:reaction == Reaction ADOMET-DMK-METHYLTRANSFER-RXN == * direction: ** left-to-right * common-name: ** s-adenosylmethionine:2-demethylquinol-8 methyltransferase *...")
 
(5 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction GLUTDEHYD-RXN ==
+
== Reaction ADOMET-DMK-METHYLTRANSFER-RXN ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** glutamate dehydrogenase
+
** s-adenosylmethionine:2-demethylquinol-8 methyltransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.4.1.4 ec-1.4.1.4]
+
** [http://enzyme.expasy.org/EC/2.1.1.163 ec-2.1.1.163]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[GLT]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[AMMONIUM]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[CPD-12115]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[REDUCED-MENAQUINONE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ10621]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ02842]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[SJ11757]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
** Category: [[annotation]]
−
* Gene: [[SJ20190]]
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ02693]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ10812]]
+
* Gene: [[SJ20751]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ10813]]
+
* Gene: [[SJ07072]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ20174]]
+
* Gene: [[SJ00609]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ13180]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[GLUTSYNIII-PWY]], L-glutamate biosynthesis III:
+
* [[MENAQUINONESYN-PWY]], menaquinol-8 biosynthesis:
 
** '''1''' reactions found over '''1''' reactions in the full pathway
 
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[PWY-5675]], nitrate reduction V (assimilatory):
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY490-3]], nitrate reduction VI (assimilatory):
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5913]], partial TCA cycle (obligate autotrophs):
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* METANETX-RXN : MNXR95819
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11615 11615]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30064 30064]
−
* LIGAND-RXN:
+
{{#set: direction=left-to-right}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00248 R00248]
+
{{#set: common-name=s-adenosylmethionine:2-demethylquinol-8 methyltransferase}}
−
* UNIPROT:
+
{{#set: ec-number=ec-2.1.1.163}}
−
** [http://www.uniprot.org/uniprot/P07262 P07262]
+
{{#set: nb gene associated=7}}
−
** [http://www.uniprot.org/uniprot/P15111 P15111]
+
{{#set: nb pathway associated=1}}
−
** [http://www.uniprot.org/uniprot/P28724 P28724]
+
{{#set: reconstruction category=orthology|annotation}}
−
** [http://www.uniprot.org/uniprot/P43793 P43793]
 
−
** [http://www.uniprot.org/uniprot/Q9JT56 Q9JT56]
 
−
** [http://www.uniprot.org/uniprot/P00370 P00370]
 
−
** [http://www.uniprot.org/uniprot/P00369 P00369]
 
−
** [http://www.uniprot.org/uniprot/P29507 P29507]
 
−
** [http://www.uniprot.org/uniprot/P28998 P28998]
 
−
** [http://www.uniprot.org/uniprot/P29051 P29051]
 
−
** [http://www.uniprot.org/uniprot/P31026 P31026]
 
−
** [http://www.uniprot.org/uniprot/P39475 P39475]
 
−
** [http://www.uniprot.org/uniprot/P39708 P39708]
 
−
** [http://www.uniprot.org/uniprot/P54387 P54387]
 
−
** [http://www.uniprot.org/uniprot/P54386 P54386]
 
−
** [http://www.uniprot.org/uniprot/P95544 P95544]
 
−
** [http://www.uniprot.org/uniprot/P78804 P78804]
 
−
</div>
 
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=glutamate dehydrogenase}}
 
−
{{#set: ec-number=ec-1.4.1.4}}
 
−
{{#set: nb gene associated=5}}
 
−
{{#set: nb pathway associated=4}}
 
−
{{#set: reconstruction category=annotation|orthology}}
 
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:21, 18 March 2021

Reaction ADOMET-DMK-METHYLTRANSFER-RXN

  • direction:
    • left-to-right
  • common-name:
    • s-adenosylmethionine:2-demethylquinol-8 methyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • MENAQUINONESYN-PWY, menaquinol-8 biosynthesis:
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR95819
  • RHEA:





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