Difference between revisions of "AGMATIN-RXN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-3142 RXN-3142] == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2....")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17475 RXN-17475] == * direction: ** reversible * common-name: ** enoyl-coa hydratase * ec-numbe...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-3142 RXN-3142] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17475 RXN-17475] ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 +
* common-name:
 +
** enoyl-coa hydratase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.3.1.170 ec-2.3.1.170]
+
** [http://enzyme.expasy.org/EC/4.2.1.17 ec-4.2.1.17]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 3 [[MALONYL-COA]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[P-COUMAROYL-COA]][c] '''+''' 4 [[PROTON]][c] '''=>''' 3 [[CARBON-DIOXIDE]][c] '''+''' 4 [[CO-A]][c] '''+''' 1 [[CPD-3041]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[D-3-HYDROXYACYL-COA]][c] '''<=>''' 1 [[CIS-D2-ENOYL-COA]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ15264]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ14591]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ07211]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ03584]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ21390]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ10275]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ03913]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY1F-FLAVSYN]], flavonoid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY1F-FLAVSYN PWY1F-FLAVSYN]
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
{{#set: direction=reversible}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R06568 R06568]
+
{{#set: common-name=enoyl-coa hydratase}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R07254 R07254]
+
{{#set: ec-number=ec-4.2.1.17}}
−
* RHEA:
+
{{#set: nb gene associated=6}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10584 10584]
+
{{#set: nb pathway associated=0}}
−
{{#set: direction=left-to-right}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: ec-number=ec-2.3.1.170}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: nb gene associated=1}}
 
−
{{#set: nb pathway associated=1}}
 
−
{{#set: reconstruction category=orthology}}
 
−
{{#set: reconstruction tool=pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 14:25, 26 August 2019

Reaction RXN-17475

  • direction:
    • reversible
  • common-name:
    • enoyl-coa hydratase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=AGMATIN-RXN&oldid=22765"