Difference between revisions of "AICARTRANSFORM-RXN"

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(Created page with "Category:reaction == Reaction GLUTDECARBOX-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/4.1.1.15 ec-4.1.1.15] == Reaction formula == *...")
(Created page with "Category:reaction == Reaction AICARTRANSFORM-RXN == * direction: ** reversible * common-name: ** aicar transformylase * ec-number: ** [http://enzyme.expasy.org/EC/2.1.2.3...")
 
(3 intermediate revisions by 2 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction GLUTDECARBOX-RXN ==
+
== Reaction AICARTRANSFORM-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 +
* common-name:
 +
** aicar transformylase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.1.1.15 ec-4.1.1.15]
+
** [http://enzyme.expasy.org/EC/2.1.2.3 ec-2.1.2.3]
 +
* synonymous:
 +
** 5-aminoimidazole-4-carboxamide ribonucleotide transformylase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[GLT]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[4-AMINO-BUTYRATE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
* 1 [[AICAR]][c] '''+''' 1 [[FORMYL-THF-GLU-N]][c] '''<=>''' 1 [[PHOSPHORIBOSYL-FORMAMIDO-CARBOXAMIDE]][c] '''+''' 1 [[THF-GLU-N]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ12405]]
+
* Gene: [[SJ21660]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY0-1305]], L-glutamate degradation IX (via 4-aminobutanoate):
+
* [[PWY-6123]], inosine-5'-phosphate biosynthesis I:
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''4''' reactions found over '''6''' reactions in the full pathway
−
* [[GLUDEG-I-PWY]], GABA shunt:
+
* [[PWY-6124]], inosine-5'-phosphate biosynthesis II:
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-4321]], L-glutamate degradation IV:
 
−
** '''3''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* METANETX-RXN : MNXR115676
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17786 17786]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22195 22195]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00261 R00261]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04560 R04560]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P20228 P20228]
+
** [http://www.uniprot.org/uniprot/P43852 P43852]
−
** [http://www.uniprot.org/uniprot/Q05329 Q05329]
+
** [http://www.uniprot.org/uniprot/P12048 P12048]
−
** [http://www.uniprot.org/uniprot/P18088 P18088]
+
** [http://www.uniprot.org/uniprot/P31335 P31335]
−
** [http://www.uniprot.org/uniprot/P14748 P14748]
+
** [http://www.uniprot.org/uniprot/P26978 P26978]
−
** [http://www.uniprot.org/uniprot/Q07346 Q07346]
+
** [http://www.uniprot.org/uniprot/P15639 P15639]
−
** [http://www.uniprot.org/uniprot/Q99259 Q99259]
+
** [http://www.uniprot.org/uniprot/Q9PNY2 Q9PNY2]
−
** [http://www.uniprot.org/uniprot/P69910 P69910]
+
** [http://www.uniprot.org/uniprot/Q9JUQ8 Q9JUQ8]
−
** [http://www.uniprot.org/uniprot/Q9CG20 Q9CG20]
+
** [http://www.uniprot.org/uniprot/P31939 P31939]
−
** [http://www.uniprot.org/uniprot/P48321 P48321]
+
** [http://www.uniprot.org/uniprot/Q59493 Q59493]
−
** [http://www.uniprot.org/uniprot/P48319 P48319]
+
** [http://www.uniprot.org/uniprot/P38009 P38009]
−
** [http://www.uniprot.org/uniprot/Q05683 Q05683]
+
** [http://www.uniprot.org/uniprot/P54113 P54113]
−
** [http://www.uniprot.org/uniprot/Q24062 Q24062]
+
** [http://www.uniprot.org/uniprot/O64767 O64767]
−
** [http://www.uniprot.org/uniprot/P69908 P69908]
+
** [http://www.uniprot.org/uniprot/O74928 O74928]
−
** [http://www.uniprot.org/uniprot/P48320 P48320]
+
{{#set: direction=reversible}}
−
** [http://www.uniprot.org/uniprot/Q59956 Q59956]
+
{{#set: common-name=aicar transformylase}}
−
** [http://www.uniprot.org/uniprot/P48318 P48318]
+
{{#set: ec-number=ec-2.1.2.3}}
−
** [http://www.uniprot.org/uniprot/Q49854 Q49854]
+
{{#set: synonymous=5-aminoimidazole-4-carboxamide ribonucleotide transformylase}}
−
** [http://www.uniprot.org/uniprot/Q49855 Q49855]
 
−
** [http://www.uniprot.org/uniprot/Q49863 Q49863]
 
−
** [http://www.uniprot.org/uniprot/O81101 O81101]
 
−
</div>
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: ec-number=ec-4.1.1.15}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:21, 18 March 2021

Reaction AICARTRANSFORM-RXN

  • direction:
    • reversible
  • common-name:
    • aicar transformylase
  • ec-number:
  • synonymous:
    • 5-aminoimidazole-4-carboxamide ribonucleotide transformylase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6123, inosine-5'-phosphate biosynthesis I:
    • 4 reactions found over 6 reactions in the full pathway
  • PWY-6124, inosine-5'-phosphate biosynthesis II:
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links






Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=AICARTRANSFORM-RXN&oldid=141488"