Difference between revisions of "AIRS-RXN"

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(Created page with "Category:reaction == Reaction 2.4.1.221-RXN == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/2.4.1.221 ec-2.4.1.221] == Reaction formula == * 1 [...")
(Created page with "Category:reaction == Reaction PHOSPHATIDATE-PHOSPHATASE-RXN == * direction: ** left-to-right * common-name: ** phosphatidate phosphatase * ec-number: ** [http://enzyme.exp...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 2.4.1.221-RXN ==
+
== Reaction PHOSPHATIDATE-PHOSPHATASE-RXN ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 +
* common-name:
 +
** phosphatidate phosphatase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.4.1.221 ec-2.4.1.221]
+
** [http://enzyme.expasy.org/EC/3.1.3.4 ec-3.1.3.4]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-13118]][c] '''+''' 1 [[Protein-L-serines]][c] '''<=>''' 1 [[GDP]][c] '''+''' 1 [[L-fucose-protein-serine]][c]
+
* 1 [[L-PHOSPHATIDATE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[DIACYLGLYCEROL]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ17651]]
+
* Gene: [[SJ07984]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ04477]]
+
* Gene: [[SJ21676]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ05347]]
+
* Gene: [[SJ21389]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ05346]]
+
* Gene: [[SJ07066]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ11787]]
+
* Gene: [[SJ13957]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[TRIGLSYN-PWY]], diacylglycerol and triacylglycerol biosynthesis:
 +
** '''5''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
{{#set: direction=reversible}}
+
* RHEA:
−
{{#set: ec-number=ec-2.4.1.221}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27430 27430]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R02239 R02239]
 +
{{#set: direction=left-to-right}}
 +
{{#set: common-name=phosphatidate phosphatase}}
 +
{{#set: ec-number=ec-3.1.3.4}}
 
{{#set: nb gene associated=5}}
 
{{#set: nb gene associated=5}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 15:31, 5 January 2021

Reaction PHOSPHATIDATE-PHOSPHATASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • phosphatidate phosphatase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • TRIGLSYN-PWY, diacylglycerol and triacylglycerol biosynthesis:
    • 5 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=AIRS-RXN&oldid=74751"