Difference between revisions of "AKGCITtm"

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(Created page with "Category:reaction == Reaction RXN-3221 == * direction: ** left-to-right * common-name: ** chalcone isomerase * ec-number: ** [http://enzyme.expasy.org/EC/5.5.1.6 ec-5.5.1....")
(Created page with "Category:reaction == Reaction AKGCITtm == * direction: ** reversible * common-name: ** dicarboxylate/tricarboxylate carrier (akg:cit), mitochondrial == Reaction formula ==...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-3221 ==
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== Reaction AKGCITtm ==
 
* direction:
 
* direction:
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
** chalcone isomerase
+
** dicarboxylate/tricarboxylate carrier (akg:cit), mitochondrial
* ec-number:
 
** [http://enzyme.expasy.org/EC/5.5.1.6 ec-5.5.1.6]
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CPD-3041]][c] '''=>''' 1 [[CPD-3061]][c]
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* 1.0 [[2-KETOGLUTARATE]][c] '''+''' 1.0 [[CIT]][m] '''<=>''' 1.0 [[2-KETOGLUTARATE]][m] '''+''' 1.0 [[CIT]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ20427]]
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* Gene: [[SJ18185]]
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
* Gene: [[SJ09285]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-2002]], isoflavonoid biosynthesis I:
 
** '''1''' reactions found over '''5''' reactions in the full pathway
 
* [[PWY-6325]], echinatin biosynthesis:
 
** '''1''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
* LIGAND-RXN:
+
{{#set: direction=reversible}}
** [http://www.genome.jp/dbget-bin/www_bget?R06556 R06556]
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{{#set: common-name=dicarboxylate/tricarboxylate carrier (akg:cit), mitochondrial}}
{{#set: direction=left-to-right}}
+
{{#set: nb gene associated=1}}
{{#set: common-name=chalcone isomerase}}
+
{{#set: nb pathway associated=0}}
{{#set: ec-number=ec-5.5.1.6}}
+
{{#set: reconstruction category=orthology}}
{{#set: nb gene associated=2}}
+
{{#set: reconstruction tool=pantograph}}
{{#set: nb pathway associated=2}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Latest revision as of 11:19, 18 March 2021

Reaction AKGCITtm

  • direction:
    • reversible
  • common-name:
    • dicarboxylate/tricarboxylate carrier (akg:cit), mitochondrial

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links