Difference between revisions of "ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN"

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(Created page with "Category:reaction == Reaction DIHYDROXYMETVALDEHYDRAT-RXN == * direction: ** left-to-right * common-name: ** 2,3-dihydroxy-3-methylvalerate dehydratase ** 2,3-dihydroxy-3-...")
(Created page with "Category:reaction == Reaction ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN == * direction: ** reversible * common-name: ** serine--pyruvate aminotransferase * ec-number: ** [h...")
 
(3 intermediate revisions by 2 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction DIHYDROXYMETVALDEHYDRAT-RXN ==
+
== Reaction ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** 2,3-dihydroxy-3-methylvalerate dehydratase
+
** serine--pyruvate aminotransferase
−
** 2,3-dihydroxy-3-methylvalerate hydro-lyase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.2.1.9 ec-4.2.1.9]
+
** [http://enzyme.expasy.org/EC/2.6.1.44 ec-2.6.1.44]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[1-KETO-2-METHYLVALERATE]][c] '''=>''' 1 [[2-KETO-3-METHYL-VALERATE]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[GLYOX]][c] '''+''' 1 [[L-ALPHA-ALANINE]][c] '''<=>''' 1 [[GLY]][c] '''+''' 1 [[PYRUVATE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ19719]]
+
* Gene: [[SJ09475]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ07216]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ19809]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5103]], L-isoleucine biosynthesis III:
+
* [[GLYSYN-ALA-PWY]], glycine biosynthesis III:
−
** '''3''' reactions found over '''7''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[ILEUSYN-PWY]], L-isoleucine biosynthesis I (from threonine):
 
−
** '''4''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-5101]], L-isoleucine biosynthesis II:
 
−
** '''4''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-5104]], L-isoleucine biosynthesis IV:
 
−
** '''2''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR95618
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27695 27695]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24248 24248]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R05070 R05070]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00369 R00369]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P55186 P55186]
+
** [http://www.uniprot.org/uniprot/P31029 P31029]
−
** [http://www.uniprot.org/uniprot/Q9JUE0 Q9JUE0]
+
** [http://www.uniprot.org/uniprot/P31030 P31030]
−
** [http://www.uniprot.org/uniprot/P05791 P05791]
+
** [http://www.uniprot.org/uniprot/P41689 P41689]
−
** [http://www.uniprot.org/uniprot/Q9UZ03 Q9UZ03]
+
** [http://www.uniprot.org/uniprot/Q94055 Q94055]
−
** [http://www.uniprot.org/uniprot/P44851 P44851]
+
** [http://www.uniprot.org/uniprot/Q56YA5 Q56YA5]
−
** [http://www.uniprot.org/uniprot/Q02139 Q02139]
+
** [http://www.uniprot.org/uniprot/P21549 P21549]
−
** [http://www.uniprot.org/uniprot/Q9PJ98 Q9PJ98]
+
{{#set: direction=reversible}}
−
** [http://www.uniprot.org/uniprot/P39522 P39522]
+
{{#set: common-name=serine--pyruvate aminotransferase}}
−
{{#set: direction=left-to-right}}
+
{{#set: ec-number=ec-2.6.1.44}}
−
{{#set: common-name=2,3-dihydroxy-3-methylvalerate dehydratase|2,3-dihydroxy-3-methylvalerate hydro-lyase}}
+
{{#set: nb gene associated=3}}
−
{{#set: ec-number=ec-4.2.1.9}}
+
{{#set: nb pathway associated=1}}
−
{{#set: nb gene associated=1}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: nb pathway associated=4}}
 
−
{{#set: reconstruction category=annotation|orthology}}
 
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}}

Latest revision as of 11:20, 18 March 2021

Reaction ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN

  • direction:
    • reversible
  • common-name:
    • serine--pyruvate aminotransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • GLYSYN-ALA-PWY, glycine biosynthesis III:
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links





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