Difference between revisions of "ALANINE-DEHYDROGENASE-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6274 RXN0-6274] == * direction: ** left-to-right * common-name: ** trna(i6a37) synthase * ec-n...")
(Created page with "Category:reaction == Reaction RXN-12477 == * direction: ** left-to-right * common-name: ** cytidine4 in trnapro 2'-o-methyltransferase * ec-number: ** [http://enzyme.expas...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6274 RXN0-6274] ==
+
== Reaction RXN-12477 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** trna(i6a37) synthase
+
** cytidine4 in trnapro 2'-o-methyltransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.5.1.75 ec-2.5.1.75]
+
** [http://enzyme.expasy.org/EC/2.1.1.225 ec-2.1.1.225]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-4211]][c] '''+''' 1 [[tRNA-Adenosines-37]][c] '''=>''' 1 [[6-Dimethylallyladenosine37-tRNAs]][c] '''+''' 1 [[PPI]][c]
+
* 1 [[Pro-tRNA-Cytidine4]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pro-tRNA-2-O-MeCytidine4]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ15410]]
+
* Gene: [[SJ07716]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-2781]], cis-zeatin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2781 PWY-2781]
+
* [[PWY-6829]], tRNA methylation (yeast):
−
** '''1''' reactions found over '''5''' reactions in the full pathway
+
** '''11''' reactions found over '''15''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
* RHEA:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01122 R01122]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=32768 32768]
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q9ZUX7 Q9ZUX7]
 
−
** [http://www.uniprot.org/uniprot/P46811 P46811]
 
−
** [http://www.uniprot.org/uniprot/P07884 P07884]
 
−
** [http://www.uniprot.org/uniprot/Q9JUU5 Q9JUU5]
 
−
** [http://www.uniprot.org/uniprot/P0A3Q6 P0A3Q6]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=trna(i6a37) synthase}}
+
{{#set: common-name=cytidine4 in trnapro 2'-o-methyltransferase}}
−
{{#set: ec-number=ec-2.5.1.75}}
+
{{#set: ec-number=ec-2.1.1.225}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 20:42, 18 December 2020

Reaction RXN-12477

  • direction:
    • left-to-right
  • common-name:
    • cytidine4 in trnapro 2'-o-methyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6829, tRNA methylation (yeast):
    • 11 reactions found over 15 reactions in the full pathway

Reconstruction information

External links





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