Difference between revisions of "ALCD19"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GMP-SYN-GLUT-RXN GMP-SYN-GLUT-RXN] == * direction: ** left-to-right * common-name: ** xanthosine-5'...")
(Created page with "Category:reaction == Reaction ADOMET-DMK-METHYLTRANSFER-RXN == * direction: ** left-to-right * common-name: ** s-adenosylmethionine:2-demethylquinol-8 methyltransferase *...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GMP-SYN-GLUT-RXN GMP-SYN-GLUT-RXN] ==
+
== Reaction ADOMET-DMK-METHYLTRANSFER-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** xanthosine-5'-phosphate:l-glutamine amido-ligase (amp-forming)
+
** s-adenosylmethionine:2-demethylquinol-8 methyltransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/6.3.5.2 ec-6.3.5.2]
+
** [http://enzyme.expasy.org/EC/2.1.1.163 ec-2.1.1.163]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[GLN]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[XANTHOSINE-5-PHOSPHATE]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[GMP]][c] '''+''' 1 [[PPI]][c] '''+''' 2 [[PROTON]][c]
+
* 1 [[CPD-12115]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[REDUCED-MENAQUINONE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ08788]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ02842]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ11757]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ02693]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ20751]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ07072]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ22386]]
+
* Gene: [[SJ00609]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ13180]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7221]], guanosine ribonucleotides de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7221 PWY-7221]
+
* [[MENAQUINONESYN-PWY]], menaquinol-8 biosynthesis:
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11681 11681]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30064 30064]
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01231 R01231]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P32073 P32073]
 
−
** [http://www.uniprot.org/uniprot/P49915 P49915]
 
−
** [http://www.uniprot.org/uniprot/O25165 O25165]
 
−
** [http://www.uniprot.org/uniprot/Q58531 Q58531]
 
−
** [http://www.uniprot.org/uniprot/Q9PN49 Q9PN49]
 
−
** [http://www.uniprot.org/uniprot/P29727 P29727]
 
−
** [http://www.uniprot.org/uniprot/O66601 O66601]
 
−
** [http://www.uniprot.org/uniprot/P49056 P49056]
 
−
** [http://www.uniprot.org/uniprot/Q9CFJ0 Q9CFJ0]
 
−
** [http://www.uniprot.org/uniprot/Q9JW60 Q9JW60]
 
−
** [http://www.uniprot.org/uniprot/P44335 P44335]
 
−
** [http://www.uniprot.org/uniprot/P38625 P38625]
 
−
** [http://www.uniprot.org/uniprot/P49057 P49057]
 
−
** [http://www.uniprot.org/uniprot/P04079 P04079]
 
−
** [http://www.uniprot.org/uniprot/Q7VLE9 Q7VLE9]
 
−
</div>
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=xanthosine-5'-phosphate:l-glutamine amido-ligase (amp-forming)}}
+
{{#set: common-name=s-adenosylmethionine:2-demethylquinol-8 methyltransferase}}
−
{{#set: ec-number=ec-6.3.5.2}}
+
{{#set: ec-number=ec-2.1.1.163}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=7}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 20:42, 18 December 2020

Reaction ADOMET-DMK-METHYLTRANSFER-RXN

  • direction:
    • left-to-right
  • common-name:
    • s-adenosylmethionine:2-demethylquinol-8 methyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • MENAQUINONESYN-PWY, menaquinol-8 biosynthesis:
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links





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