Difference between revisions of "ALCOHOL-DEHYDROG-RXN"

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(Created page with "Category:reaction == Reaction SERINE-O-ACETTRAN-RXN == * direction: ** left-to-right * common-name: ** serine acetyltransferase * ec-number: ** [http://enzyme.expasy.org/E...")
(Created page with "Category:reaction == Reaction ALCOHOL-DEHYDROG-RXN == * direction: ** reversible * common-name: ** alcohol dehydrogenase (nad) ** alcohol dehydrogenase * ec-number: ** [ht...")
 
(2 intermediate revisions by 2 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction SERINE-O-ACETTRAN-RXN ==
+
== Reaction ALCOHOL-DEHYDROG-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** serine acetyltransferase
+
** alcohol dehydrogenase (nad)
 +
** alcohol dehydrogenase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.3.1.30 ec-2.3.1.30]
+
** [http://enzyme.expasy.org/EC/1.1.1.1 ec-1.1.1.1]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ACETYL-COA]][c] '''+''' 1 [[SER]][c] '''=>''' 1 [[ACETYLSERINE]][c] '''+''' 1 [[CO-A]][c]
+
* 1 [[ETOH]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[ACETALD]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ07759]]
−
* Gene: [[SJ14691]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[SJ21601]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ15518]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[SJ14768]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ00718]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
** Category: [[orthology]]
+
== Pathway(s)  ==
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
* [[PWY-6587]], pyruvate fermentation to ethanol III:
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* Gene: [[SJ14890]]
+
* [[PWY-5480]], pyruvate fermentation to ethanol I:
−
** Category: [[annotation]]
+
** '''1''' reactions found over '''3''' reactions in the full pathway
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
* [[P161-PWY]], acetylene degradation (anaerobic):
−
** Category: [[orthology]]
+
** '''2''' reactions found over '''5''' reactions in the full pathway
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
* [[FERMENTATION-PWY]], mixed acid fermentation:
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
** '''11''' reactions found over '''16''' reactions in the full pathway
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
* [[PWY-6333]], acetaldehyde biosynthesis I:
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[PWY-5486]], pyruvate fermentation to ethanol II:
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[P122-PWY]], heterolactic fermentation:
 +
** '''16''' reactions found over '''18''' reactions in the full pathway
 +
* [[PWY66-21]], ethanol degradation II:
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[ETOH-ACETYLCOA-ANA-PWY]], ethanol degradation I:
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY4LZ-257]], superpathway of fermentation (Chlamydomonas reinhardtii):
 +
** '''7''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7118]], chitin deacetylation:
 +
** '''5''' reactions found over '''4''' reactions in the full pathway
 
</div>
 
</div>
−
== Pathway(s)  ==
 
−
* [[PWY-7870]], L-cysteine biosynthesis VII (from S-sulfo-L-cysteine):
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7274]], D-cycloserine biosynthesis:
 
−
** '''1''' reactions found over '''6''' reactions in the full pathway
 
−
* [[CYSTSYN-PWY]], L-cysteine biosynthesis I:
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-6936]], seleno-amino acid biosynthesis (plants):
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* METANETX-RXN : MNXR95725
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24560 24560]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25293 25293]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00586 R00586]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00754 R00754]
−
* UNIPROT:
+
{{#set: direction=reversible}}
−
** [http://www.uniprot.org/uniprot/Q39533 Q39533]
+
{{#set: common-name=alcohol dehydrogenase (nad)|alcohol dehydrogenase}}
−
** [http://www.uniprot.org/uniprot/Q06750 Q06750]
+
{{#set: ec-number=ec-1.1.1.1}}
−
** [http://www.uniprot.org/uniprot/P71405 P71405]
+
{{#set: nb gene associated=3}}
−
** [http://www.uniprot.org/uniprot/Q9JR86 Q9JR86]
+
{{#set: nb pathway associated=11}}
−
** [http://www.uniprot.org/uniprot/Q9PPF6 Q9PPF6]
+
{{#set: reconstruction category=annotation}}
−
** [http://www.uniprot.org/uniprot/P23145 P23145]
+
{{#set: reconstruction tool=pathwaytools}}
−
** [http://www.uniprot.org/uniprot/Q9CEI8 Q9CEI8]
 
−
** [http://www.uniprot.org/uniprot/P43886 P43886]
 
−
** [http://www.uniprot.org/uniprot/P32003 P32003]
 
−
** [http://www.uniprot.org/uniprot/P29847 P29847]
 
−
** [http://www.uniprot.org/uniprot/Q42588 Q42588]
 
−
** [http://www.uniprot.org/uniprot/Q39218 Q39218]
 
−
** [http://www.uniprot.org/uniprot/Q42538 Q42538]
 
−
** [http://www.uniprot.org/uniprot/P74089 P74089]
 
−
** [http://www.uniprot.org/uniprot/Q8W2B8 Q8W2B8]
 
−
** [http://www.uniprot.org/uniprot/Q8S895 Q8S895]
 
−
** [http://www.uniprot.org/uniprot/P93544 P93544]
 
−
** [http://www.uniprot.org/uniprot/O69218 O69218]
 
−
** [http://www.uniprot.org/uniprot/O32979 O32979]
 
−
** [http://www.uniprot.org/uniprot/P0A9D4 P0A9D4]
 
−
</div>
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: common-name=serine acetyltransferase}}
 
−
{{#set: ec-number=ec-2.3.1.30}}
 
−
{{#set: nb gene associated=4}}
 
−
{{#set: nb pathway associated=4}}
 
−
{{#set: reconstruction category=annotation|orthology}}
 
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:24, 18 March 2021

Reaction ALCOHOL-DEHYDROG-RXN

  • direction:
    • reversible
  • common-name:
    • alcohol dehydrogenase (nad)
    • alcohol dehydrogenase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6587, pyruvate fermentation to ethanol III:
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5480, pyruvate fermentation to ethanol I:
    • 1 reactions found over 3 reactions in the full pathway
  • P161-PWY, acetylene degradation (anaerobic):
    • 2 reactions found over 5 reactions in the full pathway
  • FERMENTATION-PWY, mixed acid fermentation:
    • 11 reactions found over 16 reactions in the full pathway
  • PWY-6333, acetaldehyde biosynthesis I:
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-5486, pyruvate fermentation to ethanol II:
    • 1 reactions found over 2 reactions in the full pathway
  • P122-PWY, heterolactic fermentation:
    • 16 reactions found over 18 reactions in the full pathway
  • PWY66-21, ethanol degradation II:
    • 3 reactions found over 3 reactions in the full pathway
  • ETOH-ACETYLCOA-ANA-PWY, ethanol degradation I:
    • 1 reactions found over 2 reactions in the full pathway
  • PWY4LZ-257, superpathway of fermentation (Chlamydomonas reinhardtii):
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-7118, chitin deacetylation:
    • 5 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR95725
  • RHEA:
  • LIGAND-RXN:





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