Difference between revisions of "ALDEHYDE-DEHYDROGENASE-NADP+-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.5.99.12-RXN 1.5.99.12-RXN] == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.or...")
 
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12460 RXN-12460] == * direction: ** left-to-right * common-name: ** l-asparaginyl-trnaasn hydro...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.5.99.12-RXN 1.5.99.12-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12460 RXN-12460] ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 +
* common-name:
 +
** l-asparaginyl-trnaasn hydrolase
 +
** aminoacyl-trna hydrolase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.5.99.12 ec-1.5.99.12]
+
** [http://enzyme.expasy.org/EC/3.1.1.29 ec-3.1.1.29]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[Acceptor]][c] '''+''' 1 [[CPD-4209]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[ADENINE]][c] '''+''' 1 [[Donor-H2]][c] '''+''' 1 [[PRENAL]][c]
+
* 1 [[Charged-ASN-tRNAs]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ASN]][c] '''+''' 1 [[ASN-tRNAs]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ09079]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ05960]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ00680]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ02121]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ03879]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY490-4]], L-asparagine biosynthesis III (tRNA-dependent): [http://metacyc.org/META/NEW-IMAGE?object=PWY490-4 PWY490-4]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
+
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=left-to-right}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13625 13625]
+
{{#set: common-name=aminoacyl-trna hydrolase|l-asparaginyl-trnaasn hydrolase}}
−
* LIGAND-RXN:
+
{{#set: ec-number=ec-3.1.1.29}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R05708 R05708]
+
{{#set: nb gene associated=5}}
−
{{#set: direction=reversible}}
+
{{#set: nb pathway associated=1}}
−
{{#set: ec-number=ec-1.5.99.12}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: nb gene associated=0}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: nb pathway associated=0}}
+
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction category=gap-filling}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
−
{{#set: reconstruction tool=meneco}}
 
−
{{#set: reconstruction comment=added for gapfilling}}
 
−
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
 

Revision as of 14:26, 26 August 2019

Reaction RXN-12460

  • direction:
    • left-to-right
  • common-name:
    • l-asparaginyl-trnaasn hydrolase
    • aminoacyl-trna hydrolase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY490-4, L-asparagine biosynthesis III (tRNA-dependent): PWY490-4
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=ALDEHYDE-DEHYDROGENASE-NADP%2B-RXN&oldid=23231"